ID   A0A0D2QWI9_GOSRA        Unreviewed;      1000 AA.
AC   A0A0D2QWI9;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   RecName: Full=CNH domain-containing protein {ECO:0000259|PROSITE:PS50219};
GN   ORFNames=B456_007G203400 {ECO:0000313|EMBL:KJB43503.1};
OS   Gossypium raimondii (New World cotton).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX   NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB43503.1, ECO:0000313|Proteomes:UP000032304};
RN   [1] {ECO:0000313|EMBL:KJB43503.1, ECO:0000313|Proteomes:UP000032304}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23257886; DOI=10.1038/nature11798;
RA   Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA   Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA   Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA   Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA   Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA   Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA   Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA   Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA   ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA   Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA   Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA   Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA   Wang X., Schmutz J.;
RT   "Repeated polyploidization of Gossypium genomes and the evolution of
RT   spinnable cotton fibres.";
RL   Nature 492:423-427(2012).
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DR   EMBL; CM001746; KJB43502.1; -; Genomic_DNA.
DR   EMBL; CM001746; KJB43503.1; -; Genomic_DNA.
DR   RefSeq; XP_012491657.1; XM_012636203.1.
DR   AlphaFoldDB; A0A0D2QWI9; -.
DR   STRING; 29730.A0A0D2QWI9; -.
DR   EnsemblPlants; KJB43502; KJB43502; B456_007G203400.
DR   EnsemblPlants; KJB43503; KJB43503; B456_007G203400.
DR   GeneID; 105803801; -.
DR   Gramene; KJB43502; KJB43502; B456_007G203400.
DR   Gramene; KJB43503; KJB43503; B456_007G203400.
DR   KEGG; gra:105803801; -.
DR   eggNOG; KOG2063; Eukaryota.
DR   OMA; LFRLPNF; -.
DR   OrthoDB; 38195at2759; -.
DR   Proteomes; UP000032304; Chromosome 7.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IEA:UniProt.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR   InterPro; IPR001180; CNH_dom.
DR   InterPro; IPR032914; Vam6/VPS39/TRAP1.
DR   InterPro; IPR019452; VPS39/TGF_beta_rcpt-assoc_1.
DR   InterPro; IPR019453; VPS39/TGF_beta_rcpt-assoc_2.
DR   PANTHER; PTHR12894; CNH DOMAIN CONTAINING; 1.
DR   PANTHER; PTHR12894:SF50; VACUOLAR SORTING PROTEIN 39; 1.
DR   Pfam; PF00780; CNH; 1.
DR   Pfam; PF10366; Vps39_1; 1.
DR   Pfam; PF10367; Vps39_2; 1.
DR   PROSITE; PS50219; CNH; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032304}.
FT   DOMAIN          16..287
FT                   /note="CNH"
FT                   /evidence="ECO:0000259|PROSITE:PS50219"
FT   REGION          833..865
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1000 AA;  110764 MW;  043641548CA02D2F CRC64;
     MVHSAYDSFQ LLTDCPTKID AIESYGSKLL LGCSDGSLRI YVSDSSGADR SPPSDPHALR
     KEPYALERTV AGFSKKPLIS MEVLESRELL LSLSESIAFH RLPNLETIAV ITKAKGANVY
     SWDDRRGFLC FARQKRVCIF RHDGGRGFVE VKDFGVPDTV KSMSWCGENI CLGIRKEYMI
     LNATNGALSE VFSSGKIAPP LVVALPSGEL ILGKENIGVF VDQNGKLLQA DRICWSEAPA
     VVVIQKPYAI ALFPRRVEIR SLRVPYPLIQ TIVLPGARRL TKSNNAVVVA LEKSVYGLFP
     VPLGAQIVQL TASGNFEEAL ALCKLLPPED ASLRAAKEGS IHIRYAHYLF DNGCYEEAME
     HFLASQVDIT YVLSLYQSIV LPKTTAVPEP EKLADLSLDA PQLSRGSSGM SDDLETFLPQ
     LAESDENSAL EFKKMSHNTL MALIKFLQKK RYSIVEKAAA EGTEEVVLDA VGDSFTSSRF
     KKSNKGRGNV PINSAAREMA AILDTALLQA LLLTGQSLAA VELLKGLNYC DAKICEEILH
     KGHHYAALLE LYRSNSMHRE ALTLLHQLVE ESKSNQLQAE PIQKFSPEAI IEYLKPLCGT
     DPMLVLEFSM LVLESCPTQT IELFLSGNIP ADLVNSYLKQ HAPNMQGRYL ELMLAMNENG
     ISGNLQNEMV QIYLSEVLEW YSELSAQQIW DEKAYSPTRK KLLSALESIS GYSPEALLKR
     LPPDALFEER ASLLGKMNQH ELALSLYVHK LNVPELALAY CDRVYESSVH QPPAKSSGNI
     YLTLLQIYLN PQKTTKNFEK RITNLVSSPN ASIPKISSAT SFKGRGGRKK IASIEGAEDM
     RISPSNTDSS RSDGDADAEE SNEEGGSSIM LDQVLDLLSR RWDRINGAQA LRLLPRETKL
     QNLLPFLGPL LKKSSEAYRN FSVIKSLRQS ENLQVKDELY NQRKAVVKIS SDSMCSLCNK
     KLGTSVFAVY PNGTTLVHFV CFRDSQSMKA VSKVSQLRKR
//