ID A0A0D2QXK6_GOSRA Unreviewed; 292 AA.
AC A0A0D2QXK6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=NusB/RsmB/TIM44 domain-containing protein {ECO:0000259|Pfam:PF01029};
GN ORFNames=B456_004G020300 {ECO:0000313|EMBL:KJB21866.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB21866.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB21866.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
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DR EMBL; CM001743; KJB21866.1; -; Genomic_DNA.
DR RefSeq; XP_012473006.1; XM_012617552.1.
DR AlphaFoldDB; A0A0D2QXK6; -.
DR STRING; 29730.A0A0D2QXK6; -.
DR EnsemblPlants; KJB21866; KJB21866; B456_004G020300.
DR GeneID; 105790127; -.
DR Gramene; KJB21866; KJB21866; B456_004G020300.
DR KEGG; gra:105790127; -.
DR eggNOG; ENOG502QS7J; Eukaryota.
DR OMA; VAPPNWK; -.
DR OrthoDB; 1220421at2759; -.
DR Proteomes; UP000032304; Chromosome 4.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 184..271
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 292 AA; 32494 MW; 77DD72923BD243DB CRC64;
MEGIRSSSVL SCYYSSKTHF KLRRQPLEHC FLSLPPPPPP PRHPASRPKV RISLPSMALQ
VQDHQSFHKS KEMLPKIDKS GRFCSPRAAR ELALLIVYAS CLQGSDPIRL FEKRINAARE
PGYEFDKASL LQYNHMSFGG PPVTTHSVEE ADELLRSDEQ DSAIEAEVLS APPKLVYSKL
LLSFTRKLLV ATVDKWDNHV LAIDKVVPSN WKNEPAGRIL ELSILHLAMS EITVLGTRHP
IVINEAVDLA NRFCDGAAPR IINGCLRTFV KDLAGTSTAQ TSNSKLEVPL QV
//
