ID A0A0D2SGB5_GOSRA Unreviewed; 838 AA.
AC A0A0D2SGB5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Protein FAR1-RELATED SEQUENCE {ECO:0000256|RuleBase:RU367018};
GN ORFNames=B456_005G134200 {ECO:0000313|EMBL:KJB30240.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB30240.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB30240.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- FUNCTION: Putative transcription activator involved in regulating light
CC control of development. {ECO:0000256|RuleBase:RU367018}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU367018}.
CC -!- SIMILARITY: Belongs to the FHY3/FAR1 family.
CC {ECO:0000256|ARBA:ARBA00005889, ECO:0000256|RuleBase:RU367018}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM001744; KJB30238.1; -; Genomic_DNA.
DR EMBL; CM001744; KJB30239.1; -; Genomic_DNA.
DR EMBL; CM001744; KJB30240.1; -; Genomic_DNA.
DR EMBL; CM001744; KJB30241.1; -; Genomic_DNA.
DR EMBL; CM001744; KJB30243.1; -; Genomic_DNA.
DR RefSeq; XP_012478555.1; XM_012623101.1.
DR AlphaFoldDB; A0A0D2SGB5; -.
DR EnsemblPlants; KJB30238; KJB30238; B456_005G134200.
DR EnsemblPlants; KJB30239; KJB30239; B456_005G134200.
DR EnsemblPlants; KJB30240; KJB30240; B456_005G134200.
DR EnsemblPlants; KJB30241; KJB30241; B456_005G134200.
DR EnsemblPlants; KJB30243; KJB30243; B456_005G134200.
DR Gramene; KJB30238; KJB30238; B456_005G134200.
DR Gramene; KJB30239; KJB30239; B456_005G134200.
DR Gramene; KJB30240; KJB30240; B456_005G134200.
DR Gramene; KJB30241; KJB30241; B456_005G134200.
DR Gramene; KJB30243; KJB30243; B456_005G134200.
DR OrthoDB; 1201633at2759; -.
DR Proteomes; UP000032304; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR InterPro; IPR004330; FAR1_DNA_bnd_dom.
DR InterPro; IPR031052; FHY3/FAR1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31669:SF161; PROTEIN FAR-RED ELONGATED HYPOCOTYL 3; 1.
DR PANTHER; PTHR31669; PROTEIN FAR1-RELATED SEQUENCE 10-RELATED; 1.
DR Pfam; PF03101; FAR1; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU367018}; Nucleus {ECO:0000256|RuleBase:RU367018};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|RuleBase:RU367018};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325,
KW ECO:0000256|RuleBase:RU367018}.
FT DOMAIN 564..600
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
FT REGION 127..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 696..725
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 838 AA; 95995 MW; D58A89701ACC10C4 CRC64;
MDIDLRLPSG EQCKEDEDAN GIDNMLDGDE SLHNGMVQVV GEALRAEDGG EMHSSAVDMV
TFKEDTNLEP LSGMEFESHG EAYSFYQEYA RSMGFNTAIQ NSRRSKTSRE FIDAKFACSR
YGTKREYDKS FNRPRARQSK QDPENATGRR SCSKTDCKAS MHVKRRPDGK WVIHSFVKEH
NHELLPAQAV SEQTRRMYAA MARQFAEYKN VVGLKNDPKN PFDKGRNLAL EAADVKILLE
FFTHMQSINS NFFYAVDLGE DQRLKSLFWV DSKSRHDYSY FCDAVSFDTT YVTNKYKMPL
ALFIGVNHHY QCIPLGCALV SDESAATFSW LMQTWLKAMG GQSPRVLITD QDRTLKSVVA
EIFPNTLHCF FLWHVLGKVS ENLGHVIKQY GNLMEKFEKC IYRSWTDEEF GKRWWKILDR
FELKDDEWMK SLYEDRKKWV PTYIMNVLLA GMSTVQRAES VNSFFDKYVH KKTTVQDFLK
HYEAILQDRY EEEAKANSDS WSKVPALKSP SPFEKSVAGV YTHTLFKKFQ IEVVGAIACH
PKPENHDSTC SIFRVQDLEK NQDFIVTLNE MKAEVSCICR LYEYKGYLCR HAMVVLQING
RSAIPSQYIL KRWTKEAKSR HFMGEESEQV QSRAQRYNDL FQRGMKLIEE GSLSQESYYI
AFRSLEEAFG NCLSANTSNK SLAEAVASPT QGMICIEEDN QSRSTSKTNK KKNPTKKRKG
NSEQEVMAVA PTDGLQQMDK LSSRSVALDS YFGAQPSVQG MVQLNLMAPR DNYYGNQQTI
QGLGQLNTIA TSHDGYYGTQ QAMPGMGPMD FFRSPSFYIR DDPNVRVAQL HDDASRHT
//
