ID A0A0D2SHG0_GOSRA Unreviewed; 338 AA.
AC A0A0D2SHG0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:KJB62568.1};
GN ORFNames=B456_009G423400 {ECO:0000313|EMBL:KJB62568.1}, Gorai_013673
GN {ECO:0000313|EMBL:MBA0596867.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB62568.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB62568.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0596867.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0596867.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0596867.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0596867.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0596867.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0596867.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM001748; KJB62568.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000009; MBA0596867.1; -; Genomic_DNA.
DR RefSeq; XP_012443436.1; XM_012587982.1.
DR AlphaFoldDB; A0A0D2SHG0; -.
DR STRING; 29730.A0A0D2SHG0; -.
DR EnsemblPlants; KJB62568; KJB62568; B456_009G423400.
DR GeneID; 105768199; -.
DR Gramene; KJB62568; KJB62568; B456_009G423400.
DR KEGG; gra:105768199; -.
DR eggNOG; ENOG502QU4B; Eukaryota.
DR OMA; QMGENER; -.
DR OrthoDB; 456840at2759; -.
DR Proteomes; UP000032304; Chromosome 9.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR26312:SF67; CHLOROPLAST LUMEN COMMON FAMILY PROTEIN; 1.
DR PANTHER; PTHR26312; TETRATRICOPEPTIDE REPEAT PROTEIN 5; 1.
DR Pfam; PF13371; TPR_9; 1.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 133..166
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT COILED 211..238
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 338 AA; 39088 MW; C74B7D9230323776 CRC64;
MESFATLHCR HQPLHLSFIH HRPYFHKPIF SLSFRASSSF KLSSIRASSS STPFFEPPKP
SPSLLQTLTP LLKTTCITVT AAAALFFARF YQKPALAALT TPIVETATRE SMVSLEEQEK
TLVQKLGKTP NDVETLRSLM EVRIKLKKLQ QAIDVIERLI RLEPQDPEWP MLRAQIHSYA
GNFELAKKEF EEILAKDPDR VEAFHGLVMA YSDSGQKLKE LEKRIEGAME KCKKEKKNKD
FRDFKLLIAQ IRVIEGRHSE ALKVYEGLVK EEPKDFRPYL CMGIIYTLLK KKAEAEKQFE
KFRKLVPKNH PYREYFVDNM IATRLFAEKA EREGAVKR
//
