ID A0A0D2T588_GOSRA Unreviewed; 377 AA.
AC A0A0D2T588;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 24.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=B456_011G094000 {ECO:0000313|EMBL:KJB70863.1}, Gorai_005654
GN {ECO:0000313|EMBL:MBA0599434.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB70863.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB70863.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0599434.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0599434.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0599434.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0599434.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0599434.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0599434.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM001750; KJB70863.1; -; Genomic_DNA.
DR EMBL; CM001750; KJB70864.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000011; MBA0599434.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2T588; -.
DR EnsemblPlants; KJB70863; KJB70863; B456_011G094000.
DR EnsemblPlants; KJB70864; KJB70864; B456_011G094000.
DR Gramene; KJB70863; KJB70863; B456_011G094000.
DR Gramene; KJB70864; KJB70864; B456_011G094000.
DR Proteomes; UP000032304; Chromosome 11.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47801; OS05G0145600 PROTEIN; 1.
DR PANTHER; PTHR47801:SF1; OS05G0145600 PROTEIN; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 9..43
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 44..78
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 79..113
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 377 AA; 42109 MW; FA4D8D911E6D5035 CRC64;
MMLDGVQPTR DTFEALIMGT MRGSRLQDAL FFRDEMKAMG LVPEVSLYNF LISTCGKCKN
ANLAIQILEE MKRYNVKPNG QTYVCLINAC AAAGRLDQVL AIVRDMTAAG GELNKFCYAG
LIIAHMNKTP RSDDVAAKII ELAEQSKGWS SVEESGNTGN TMLGISEEEL YNLPTAEFVH
RRFFIYRQFT VYHVAFHACA DLKNVEATET LLEMLKKDGK VPDTFITMQI MRCYLHAGNI
DHAVQIFEDY MNGGKPPAME LYATLIEGAM VGYTPRGMEL AQETLVNMTK RNFFLNSKFG
SDLLLIAAGE KTGGYTNANY IWDLMQARKI VPSLPAVEAY YSGLKGREIP EDDPRLQLVT
RTLNNLRARF GPSLGRP
//
