ID A0A0D2TB38_GOSRA Unreviewed; 626 AA.
AC A0A0D2TB38;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=B456_009G006800 {ECO:0000313|EMBL:KJB53829.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB53829.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB53829.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM001748; KJB53829.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D2TB38; -.
DR EnsemblPlants; KJB53829; KJB53829; B456_009G006800.
DR Gramene; KJB53829; KJB53829; B456_009G006800.
DR eggNOG; KOG4197; Eukaryota.
DR OMA; QLCAKTR; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 86..116
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 117..151
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 187..221
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 319..353
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 354..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 534..626
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 626 AA; 69988 MW; F5ECB223F390F46D CRC64;
MINTLYGYSR NLCCTRILHC KKFSAVGVAA AVQLETPTPV TLSRRRMSNT WVSYLHAVLQ
LCARNKASIQ GKACHARAIR FGLQEDTTTS NILINVYCKS GLLSSARKVF DGMPARSLVS
WNTLIGSYAQ NGEAHEALSL FKLMQRNGSS FSEFTISSVV CASVAICAVF VCKQLHGFAI
KAAVDSNVFV GTALADVYAK SGLVKEASRV FESMQERSVV TWSCMVVGYV QNELFEEALL
LFHRAQKMEV EHDHFILSSI ICGCAGVAAL IEGKQVHAII SKTGFCSNIF VASSLIDLYA
KCGSVEEAYT VFTNVEDKNV VSWNAMISGF AKHARALEAM ISFEKMQQMG LYPNEVTYIS
VLSACSHMGL VDEAKSYFDL MITKHNISPN VIHYSCMVDT LGRAGMISEA YDLIQRMPFV
ATASMWGSLL ACCRFHGNLE MAEIAAKHLF EMEPDNAGNY ILLSNIYAAN KKWEEVVRAR
KFLKENVVKN EKGKSWIAVK DKVHKFMVGE LNHPRIAEIY SKLDSLVEEV KILGYKFETE
HELHDVEESR KQELLKHHSE KLALSFGLLS LPASAPIRIM KNLRICGDCH SFMKHASSST
QREIIVRDIN RFHHFRKGRC SCCDFW
//
