ID A0A0D2TD84_GOSRA Unreviewed; 483 AA.
AC A0A0D2TD84;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=FYVE-type domain-containing protein {ECO:0000259|PROSITE:PS50178};
GN ORFNames=B456_009G038300 {ECO:0000313|EMBL:KJB54554.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB54554.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB54554.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001748; KJB54554.1; -; Genomic_DNA.
DR RefSeq; XP_012444542.1; XM_012589088.1.
DR AlphaFoldDB; A0A0D2TD84; -.
DR STRING; 29730.A0A0D2TD84; -.
DR EnsemblPlants; KJB54554; KJB54554; B456_009G038300.
DR GeneID; 105768862; -.
DR Gramene; KJB54554; KJB54554; B456_009G038300.
DR KEGG; gra:105768862; -.
DR eggNOG; KOG1843; Eukaryota.
DR OMA; VAPCYSY; -.
DR OrthoDB; 37167at2759; -.
DR Proteomes; UP000032304; Chromosome 9.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd11526; SYLF_FYVE; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR007461; Ysc84_actin-binding.
DR InterPro; IPR000306; Znf_FYVE.
DR InterPro; IPR017455; Znf_FYVE-rel.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15629:SF2; SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1; 1.
DR PANTHER; PTHR15629; SH3YL1 PROTEIN; 1.
DR Pfam; PF01363; FYVE; 1.
DR Pfam; PF04366; Ysc84; 1.
DR SMART; SM00064; FYVE; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS50178; ZF_FYVE; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00091}.
FT DOMAIN 173..235
FT /note="FYVE-type"
FT /evidence="ECO:0000259|PROSITE:PS50178"
SQ SEQUENCE 483 AA; 52534 MW; 0570EF104A2C9A5C CRC64;
MASLEGGVSF SYLSKLEKGN KNAFQFDDDY RDAVWTVPQD KSIVPLGSKS MKNDYLYQFR
AESDDFIDGE YDSGDDVSKS MQNGLYPEVN LKNVLSGLVA IVTGRNKGSL GASVDQQYQS
SNVSFLGSEK NGDTYLHSSV YIPSAPPLLE SSGIDYNAYK EVLEAEPPEW IPDSSTSVCM
QCSAPFTALT RGRHHCRFCG GIFCRACSKG RCLLPVKFRE RNPQRVCDSC YDRLDPLQGV
LINTISNAVQ VAKHDVMDWT CTRGWLNLPF GLSMEHEIYK ASNTLRSYCQ VARLNPERSI
PWAVLRGAKG LAILTVVKAG VLVAYKLGTG LVIARRSDGT WSAPSALCSV GLGWGAQIGG
ELMDFIIVLH DSKAVKTFCS RMHFSLGAGC SAAAGPVGRV LEADLRAGDG GSGMCYSYSC
SKGAFVGVSL EGNIVATRMD TNLRFYGDPY LTTADILLGT VDRPKAAEPL YAALHNLYSS
LRF
//
