ID A0A0D2URY8_GOSRA Unreviewed; 697 AA.
AC A0A0D2URY8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS50016};
GN ORFNames=B456_011G120900 {ECO:0000313|EMBL:KJB71394.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB71394.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB71394.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
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DR EMBL; CM001750; KJB71394.1; -; Genomic_DNA.
DR RefSeq; XP_012453739.1; XM_012598285.1.
DR AlphaFoldDB; A0A0D2URY8; -.
DR STRING; 29730.A0A0D2URY8; -.
DR EnsemblPlants; KJB71394; KJB71394; B456_011G120900.
DR GeneID; 105775779; -.
DR Gramene; KJB71394; KJB71394; B456_011G120900.
DR KEGG; gra:105775779; -.
DR eggNOG; KOG1844; Eukaryota.
DR OMA; GIERWTV; -.
DR OrthoDB; 455444at2759; -.
DR Proteomes; UP000032304; Chromosome 11.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15556; PHD_MMD1_like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46201:SF3; OS01G0877500 PROTEIN; 1.
DR PANTHER; PTHR46201; PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 619..669
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
SQ SEQUENCE 697 AA; 78205 MW; E80C95913E876505 CRC64;
MVVNAVPMKR IKRRVTVDLY DFLTFPSTSS SFGFGGTTPF RANIRSFLTK HALMPPLSSL
FPHMMIWQIV FRVDDVTDNL DSSSSVVCLD VVEEDVARSR SVYCDQCRVV GWSEHPVCSK
RYHFIIKVDG NSIGGYHKPC VRCGDILHLS ELRCKSCNHV TTTDDVEDWV YHQLEDTTHL
LHGVIHSNGY GHLLRVNGRE GGSRVLSGCH IMDFWDRLCK TLGVRKVSVT DVSKKYGLEY
RLLHAITKGH PWYGDWGYEF GAGSFALTFD AYRSAIETLS SLPLSLFLPQ GSKPSTRLQD
VISFYRSLSK CELLNIKDVF SFLMRLIHDA HKSSLRVGDA TFKKQRTSSV LSWSRVDVVR
VEEAMFRVLR AVSGSNWVSS RALRGAVCRV APPTLLDHCL MELNGKLAVE GMVVKARHNP
NSGSLEYRLE PQNVSITTNC NDNCVPNFLP SKEILKQDLK LLYESILHPQ TMSTCLPEAI
RNLTISSAEK LLDCKQFVKH YNNEKLSSGN EDVICISCEL ELMDQHKEIT PDPPAELVVL
PINAIVLDLK IEASKAFQEV YLAFRRFQAE ELLGYTGVED STQVKLLMGS TGSVRVRGRC
LGKSGLSKYR LERGVERWTV DCTCGAKDDD GERMLACDVC GVWQHTRCFG INDSDAVPAK
FVCNRCKESL QMTLSVVQCK NESGSFGKGL ATSYDVR
//
