ID A0A0D2V5H0_GOSRA Unreviewed; 697 AA.
AC A0A0D2V5H0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE RecName: Full=Thioredoxin domain-containing protein {ECO:0000259|Pfam:PF00085};
GN ORFNames=B456_010G042300 {ECO:0000313|EMBL:KJB64310.1}, Gorai_007104
GN {ECO:0000313|EMBL:MBA0597295.1};
OS Gossypium raimondii (New World cotton).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium.
OX NCBI_TaxID=29730 {ECO:0000313|EMBL:KJB64310.1, ECO:0000313|Proteomes:UP000032304};
RN [1] {ECO:0000313|EMBL:KJB64310.1, ECO:0000313|Proteomes:UP000032304}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23257886; DOI=10.1038/nature11798;
RA Paterson A.H., Wendel J.F., Gundlach H., Guo H., Jenkins J., Jin D.,
RA Llewellyn D., Showmaker K.C., Shu S., Udall J., Yoo M.J., Byers R.,
RA Chen W., Doron-Faigenboim A., Duke M.V., Gong L., Grimwood J., Grover C.,
RA Grupp K., Hu G., Lee T.H., Li J., Lin L., Liu T., Marler B.S., Page J.T.,
RA Roberts A.W., Romanel E., Sanders W.S., Szadkowski E., Tan X., Tang H.,
RA Xu C., Wang J., Wang Z., Zhang D., Zhang L., Ashrafi H., Bedon F.,
RA Bowers J.E., Brubaker C.L., Chee P.W., Das S., Gingle A.R., Haigler C.H.,
RA Harker D., Hoffmann L.V., Hovav R., Jones D.C., Lemke C., Mansoor S.,
RA ur Rahman M., Rainville L.N., Rambani A., Reddy U.K., Rong J.K.,
RA Saranga Y., Scheffler B.E., Scheffler J.A., Stelly D.M., Triplett B.A.,
RA Van Deynze A., Vaslin M.F., Waghmare V.N., Walford S.A., Wright R.J.,
RA Zaki E.A., Zhang T., Dennis E.S., Mayer K.F., Peterson D.G., Rokhsar D.S.,
RA Wang X., Schmutz J.;
RT "Repeated polyploidization of Gossypium genomes and the evolution of
RT spinnable cotton fibres.";
RL Nature 492:423-427(2012).
RN [2] {ECO:0000313|EMBL:MBA0597295.1, ECO:0000313|Proteomes:UP000593578}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=8 {ECO:0000313|EMBL:MBA0597295.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0597295.1};
RX PubMed=30476109;
RA Grover C.E., Arick M.A. 2nd, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Frelichowski J.E., Scheffler J.A., Scheffler B.E.,
RA Wendel J.F.;
RT "Insights into the Evolution of the New World Diploid Cottons (Gossypium,
RT Subgenus Houzingenia) Based on Genome Sequencing.";
RL Genome Biol. Evol. 11:53-71(2019).
RN [3] {ECO:0000313|EMBL:MBA0597295.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=8 {ECO:0000313|EMBL:MBA0597295.1};
RC TISSUE=Leaf {ECO:0000313|EMBL:MBA0597295.1};
RA Grover C.E., Arick M.A. II, Thrash A., Conover J.L., Sanders W.S.,
RA Peterson D.G., Scheffler J.A., Scheffler B.E., Wendel J.F.;
RL Submitted (APR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM001749; KJB64310.1; -; Genomic_DNA.
DR EMBL; JABEZZ010000010; MBA0597295.1; -; Genomic_DNA.
DR RefSeq; XP_012452330.1; XM_012596876.1.
DR AlphaFoldDB; A0A0D2V5H0; -.
DR STRING; 29730.A0A0D2V5H0; -.
DR EnsemblPlants; KJB64310; KJB64310; B456_010G042300.
DR GeneID; 105774389; -.
DR Gramene; KJB64310; KJB64310; B456_010G042300.
DR KEGG; gra:105774389; -.
DR eggNOG; KOG0907; Eukaryota.
DR eggNOG; KOG1124; Eukaryota.
DR OMA; SNKATHK; -.
DR OrthoDB; 1220260at2759; -.
DR Proteomes; UP000032304; Chromosome 10.
DR Proteomes; UP000593578; Unassembled WGS sequence.
DR CDD; cd02947; TRX_family; 1.
DR Gene3D; 3.40.30.10; Glutaredoxin; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR036249; Thioredoxin-like_sf.
DR InterPro; IPR013766; Thioredoxin_domain.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR001440; TPR_1.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR044534; TTL1-4.
DR PANTHER; PTHR46050:SF18; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46050; TPR REPEAT-CONTAINING THIOREDOXIN; 1.
DR Pfam; PF00085; Thioredoxin; 1.
DR Pfam; PF00515; TPR_1; 2.
DR Pfam; PF13431; TPR_17; 1.
DR Pfam; PF13174; TPR_6; 1.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF52833; Thioredoxin-like; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032304};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT REPEAT 231..264
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 600..687
FT /note="Thioredoxin"
FT /evidence="ECO:0000259|Pfam:PF00085"
FT REGION 28..150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 43..68
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..150
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 697 AA; 77303 MW; 97B92558206DEDA0 CRC64;
MTKCSMEQEL GCGLMGGVLQ RWSNWSKKSS VPALPGKGMN KVSKEPVTDK SKKLSNNDDS
RRRRSTSTVE PVLLDSSNLA KPLPEQDQKP VRKSELLPPR NSVSYSHPVK DSRRRSNTGR
SSTSSSSGST HHSKELAKVT TSDQQQSNNS KALIRATSSN IMLAGQLGNL RQLGAGSAVG
NNGSNATIEA LDKLPRKNSL GKLGGSVMGN IIRQPSDEFK QLHGLTGRLD PETLKNKGNE
AYKQGRFEEA LALYERAISL DSKQATYRCN KSAALLGLGR LMEAIVECKE AIQLDPTYCR
AHHRLATIYL RLGDPEHALY HYKQAGNHAD SNHISEAQTL IQRLKRCSDA RKSHEWNTLL
KETQCVITSG VDSAPEVYAL QTEALLKINK HQEACITYNK GPKFAIESCI NFFGLTVSAY
LLMIKALVNM VSGRLDEAVS AAQHAARLDP GNKEISLVVK RTRAVSSARL SGNLLFKASK
FVEACIVYGE GLEYDSYNPL LLCNRAACRS KLGQFEKAIE DCTAALNVQP SYSKARLRRA
DCNSKLERWE TAIQDYEKLI RETPGDKEVA RALFEAKVQL KKQHGEDIED LKFGSNLVLV
SSNERFRHFV TSAGMTVVLF CNKTKHKKVV QIMEQVCKRF PSINFLKVEI EDHPYLAKSE
ALTCIPAFKI YKNGSRVKEV PGNDPELLER SVKLYSS
//
