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Database: UniProt
Entry: A0A0D2ZRS9_BRAOL
LinkDB: A0A0D2ZRS9_BRAOL
Original site: A0A0D2ZRS9_BRAOL 
ID   A0A0D2ZRS9_BRAOL        Unreviewed;       562 AA.
AC   A0A0D2ZRS9;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   RecName: Full=Nicalin {ECO:0000256|PIRNR:PIRNR011018};
GN   Name=106320288 {ECO:0000313|EnsemblPlants:Bo00874s030.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo00874s030.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo00874s030.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TO1000 {ECO:0000313|EnsemblPlants:Bo00874s030.1};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo00874s030.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the nicastrin family.
CC       {ECO:0000256|ARBA:ARBA00007717, ECO:0000256|PIRNR:PIRNR011018}.
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DR   RefSeq; XP_013614106.1; XM_013758652.1.
DR   AlphaFoldDB; A0A0D2ZRS9; -.
DR   STRING; 109376.A0A0D2ZRS9; -.
DR   EnsemblPlants; Bo00874s030.1; Bo00874s030.1; Bo00874s030.
DR   GeneID; 106320288; -.
DR   Gramene; Bo00874s030.1; Bo00874s030.1; Bo00874s030.
DR   KEGG; boe:106320288; -.
DR   eggNOG; KOG2526; Eukaryota.
DR   HOGENOM; CLU_034102_2_0_1; -.
DR   OMA; GGCITAY; -.
DR   OrthoDB; 458841at2759; -.
DR   Proteomes; UP000032141; Unassembled WGS sequence.
DR   GO; GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0009966; P:regulation of signal transduction; IEA:InterPro.
DR   CDD; cd03882; M28_nicalin_like; 1.
DR   Gene3D; 3.40.630.10; Zn peptidases; 1.
DR   InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR   InterPro; IPR016574; Nicalin.
DR   PANTHER; PTHR31826; NICALIN; 1.
DR   PANTHER; PTHR31826:SF7; NICALIN; 1.
DR   Pfam; PF05450; Nicastrin; 1.
DR   PIRSF; PIRSF011018; Nicalin; 1.
DR   SUPFAM; SSF53187; Zn-dependent exopeptidases; 1.
DR   PROSITE; PS00018; EF_HAND_1; 1.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   3: Inferred from homology;
KW   Endoplasmic reticulum {ECO:0000256|ARBA:ARBA00022824};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..39
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           40..562
FT                   /note="Nicalin"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5002256156"
FT   TRANSMEM        520..544
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   562 AA;  62145 MW;  98AC5EBC4FFBDF62 CRC64;
     MAEEKNSKQR HHRSMFLESM YPVVALMLVL VACVELCDAA TVVDVYRLIQ YDISGAPFGS
     RFSSLNHHAA SLSFQHGADL SRSVLILPLR ELDIAFVQDY ISQKQSLGGL LILLPQTFRP
     GNIGGGETQG LRILLAQLEK LLLRSNIPFP VYFAFENEET DTMLADVKKN DALGQQATAT
     TGGYKLVISV SEPRKIASPT ITNIQGWLPG SRADGDSNQL STIAVVASYD TFGAAPALSV
     GSDSNGSGVV ALLEVARLFS TLYSNPKTRG RYNLLFALTS GGPYNYEGTQ KWLKSLDQRM
     RESIDYAICL NSVGSWDNEL LVHVSKPPEN AYIKQIFEGF SNVAEDLGFQ VSLKHKKINI
     SNSRVAWEHE QFSRLRVTAA TVSELLTPPE LLESAGSLSD TRQHVNEDSI IKGVKLVAES
     LARHIYGHQG KDIQIFADNS SLAVNRFYVK SWLDGLSQTP RVAPFLSKNE PLIMALKKEL
     EDYTAEVSIQ QESLDGIFTF YDSTKASLNI YQVASVTFDL LLLLVLGSYL IMLFSFLVIT
     TRGLDDLISI FRRPPSRKMK IA
//
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