ID A0A0D3AFB4_BRAOL Unreviewed; 602 AA.
AC A0A0D3AFB4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304};
GN Name=106328880 {ECO:0000313|EnsemblPlants:Bo1g148940.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo1g148940.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo1g148940.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo1g148940.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC Evidence={ECO:0000256|ARBA:ARBA00001936};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC {ECO:0000256|ARBA:ARBA00004922}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane
CC {ECO:0000256|ARBA:ARBA00004323}; Single-pass type II membrane protein
CC {ECO:0000256|ARBA:ARBA00004323}. Membrane
CC {ECO:0000256|ARBA:ARBA00004606}; Single-pass type II membrane protein
CC {ECO:0000256|ARBA:ARBA00004606}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 31 family.
CC {ECO:0000256|ARBA:ARBA00008661}.
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DR RefSeq; XP_013622903.1; XM_013767449.1.
DR AlphaFoldDB; A0A0D3AFB4; -.
DR STRING; 109376.A0A0D3AFB4; -.
DR EnsemblPlants; Bo1g148940.1; Bo1g148940.1; Bo1g148940.
DR GeneID; 106328880; -.
DR Gramene; Bo1g148940.1; Bo1g148940.1; Bo1g148940.
DR KEGG; boe:106328880; -.
DR eggNOG; KOG2287; Eukaryota.
DR HOGENOM; CLU_017063_1_0_1; -.
DR OMA; RFHNSGC; -.
DR OrthoDB; 532757at2759; -.
DR UniPathway; UPA00378; -.
DR Proteomes; UP000032141; Chromosome C1.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:1990714; F:hydroxyproline O-galactosyltransferase activity; IEA:EnsemblPlants.
DR GO; GO:0010405; P:arabinogalactan protein metabolic process; IEA:EnsemblPlants.
DR GO; GO:0048354; P:mucilage biosynthetic process involved in seed coat development; IEA:EnsemblPlants.
DR GO; GO:0018258; P:protein O-linked glycosylation via hydroxyproline; IEA:EnsemblPlants.
DR GO; GO:0080147; P:root hair cell development; IEA:EnsemblPlants.
DR CDD; cd00070; GLECT; 1.
DR Gene3D; 2.60.120.200; -; 1.
DR Gene3D; 3.90.550.50; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR001079; Galectin_CRD.
DR InterPro; IPR002659; Glyco_trans_31.
DR PANTHER; PTHR11214:SF3; BETA-1,3-GALACTOSYLTRANSFERASE BRE-5; 1.
DR PANTHER; PTHR11214; BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE; 1.
DR Pfam; PF00337; Gal-bind_lectin; 1.
DR Pfam; PF01762; Galactosyl_T; 1.
DR SMART; SM00908; Gal-bind_lectin; 1.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 1.
DR PROSITE; PS51304; GALECTIN; 1.
PE 3: Inferred from homology;
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Signal-anchor {ECO:0000256|ARBA:ARBA00022968};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..39
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 162..326
FT /note="Galectin"
FT /evidence="ECO:0000259|PROSITE:PS51304"
SQ SEQUENCE 602 AA; 68201 MW; 6C6C969C7E086FD6 CRC64;
MMLQSMSMVK LKFGFTSVRM RNLSVGISVM VLTLILIILQ PGHKLTKKNL TVDEFDIEEE
STVLITMEDL DYLFSNSSFY KEEDESNGFL VWSLMRPFLE RHDALPETGQ GVEEAALAGK
GLVSLINKEK GHSASGMVST KGRRTCPDFV NAVDVDLSGS TPVLELPCGL TEDSSITFVG
VPDEHSRSFQ IQLLGSGVLR YDVNFSKQSI VQNTWTERSG WGEEVRCPSH GSFKNYIVVD
ELPLCNEQTS RITLDDFPFL KGSPLTATLW FGLEGFHMAV NGRHETSFPY REVRNDATKS
LQKLEPWLVS AVKVSGGLKL LSASATRLPV PDENHSSLAI EEKLKAPPLS GTRITLLVGV
FSTGNNFKRR MALRRSWMQY EAVRSGEVAV RFLIGLHTNE QVNLEMWREA KAYGDIQFMP
FVDYYGLLSL KTVALCILGT KVIPSKYIMK TDDDAFVRID ELLMSLKEKP SNALLYGLIS
FDSSPDREQG SKWYIRKEEW PLDSYPPWAH GPGYIITQDI AKFVVKGHLE RDLRLFKLED
VAIGIWIQQY NQTVKRVKYM NDKRFHNSGC KPNYILVHYQ TPRLLLCLWE KLQKESQSVC
CE
//
