ID A0A0D3AG39_BRAOL Unreviewed; 395 AA.
AC A0A0D3AG39;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 39.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN Name=106344246 {ECO:0000313|EnsemblPlants:Bo1g157630.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo1g157630.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo1g157630.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo1g157630.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013639111.1; XM_013783657.1.
DR AlphaFoldDB; A0A0D3AG39; -.
DR STRING; 109376.A0A0D3AG39; -.
DR EnsemblPlants; Bo1g157630.1; Bo1g157630.1; Bo1g157630.
DR GeneID; 106344246; -.
DR Gramene; Bo1g157630.1; Bo1g157630.1; Bo1g157630.
DR KEGG; boe:106344246; -.
DR eggNOG; KOG1190; Eukaryota.
DR HOGENOM; CLU_033500_0_0_1; -.
DR OMA; YMYPPAD; -.
DR OrthoDB; 4825346at2759; -.
DR Proteomes; UP000032141; Chromosome C1.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12686; RRM1_PTBPH1_PTBPH2; 1.
DR CDD; cd12691; RRM2_PTBPH1_PTBPH2; 1.
DR CDD; cd12690; RRM3_PTBPH1_PTBPH2; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034792; PTBPH1/PTBPH2_RRM1.
DR InterPro; IPR034793; PTBPH1/PTBPH2_RRM2.
DR InterPro; IPR034794; PTBPH1/PTBPH2_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF14; POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 1; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 14..92
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 242..319
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 371..395
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 395 AA; 43480 MW; 4D4D8FBD9252A3D2 CRC64;
MASSQFRYTQ TPSKVVHLRN LPWECVEEEL IDLCKRFSKI VNTKTNVGAN RNQAFVEFGD
VNQAISMVSY YASSSEPAQI RGKTVYIQYS NRHEIVNNQS PGEVPGNVLL VTFEGVQSHH
VCIDVIHLVF SAYGFVHKIA TFEKAAGFQA LVQFTDVDTA LAARTALDGR SIPKYLLPEH
VGSCNLRMSY SAHTDLNIKF QSHRSRDYTN PYLPVNQTAM DGSMQPALGA DGKRVETQSN
VLLALIENMQ YAVTVDVLHT VFSAYGTVQK IAIFEKNGST QALIQYSDIS TATMAKEALE
GHCIYDGGYC KLRLTYSRHT DLNVKAFSDK SRDYTLPDLS QLVGQKVPGV AAASGPTDGW
PNGQVQTQYM GSSYMYPPAD PTGASPSSGH PPYYG
//
