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Database: UniProt
Entry: A0A0D3AJK1_BRAOL
LinkDB: A0A0D3AJK1_BRAOL
Original site: A0A0D3AJK1_BRAOL 
ID   A0A0D3AJK1_BRAOL        Unreviewed;       383 AA.
AC   A0A0D3AJK1;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 34.
DE   RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
GN   Name=106326881 {ECO:0000313|EnsemblPlants:Bo2g013840.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo2g013840.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo2g013840.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo2g013840.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   RefSeq; XP_013620285.1; XM_013764831.1.
DR   AlphaFoldDB; A0A0D3AJK1; -.
DR   STRING; 109376.A0A0D3AJK1; -.
DR   EnsemblPlants; Bo2g013840.1; Bo2g013840.1; Bo2g013840.
DR   GeneID; 106326881; -.
DR   Gramene; Bo2g013840.1; Bo2g013840.1; Bo2g013840.
DR   KEGG; boe:106326881; -.
DR   eggNOG; KOG1911; Eukaryota.
DR   HOGENOM; CLU_035097_1_0_1; -.
DR   OMA; GRMVEPH; -.
DR   OrthoDB; 75895at2759; -.
DR   Proteomes; UP000032141; Chromosome C2.
DR   GO; GO:0000792; C:heterochromatin; IEA:UniProt.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0031507; P:heterochromatin formation; IEA:InterPro.
DR   CDD; cd00024; CD_CSD; 1.
DR   Gene3D; 2.40.50.40; -; 1.
DR   InterPro; IPR016197; Chromo-like_dom_sf.
DR   InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR   InterPro; IPR017984; Chromo_dom_subgr.
DR   InterPro; IPR023780; Chromo_domain.
DR   InterPro; IPR008251; Chromo_shadow_dom.
DR   InterPro; IPR023779; Chromodomain_CS.
DR   InterPro; IPR044251; LHP1-like.
DR   PANTHER; PTHR47240:SF4; CHROMO DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47240; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR   Pfam; PF00385; Chromo; 1.
DR   PRINTS; PR00504; CHROMODOMAIN.
DR   SMART; SM00298; CHROMO; 1.
DR   SMART; SM00300; ChSh; 1.
DR   SUPFAM; SSF54160; Chromo domain-like; 1.
DR   PROSITE; PS00598; CHROMO_1; 1.
DR   PROSITE; PS50013; CHROMO_2; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          82..130
FT                   /note="Chromo"
FT                   /evidence="ECO:0000259|PROSITE:PS50013"
FT   REGION          1..80
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          129..181
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          251..289
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        51..68
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        137..152
FT                   /note="Basic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        164..181
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        265..289
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   383 AA;  42590 MW;  553F9535DDFB18B7 CRC64;
     MKGACVKKKT HLVNDAGEAE TVGESGKRSG GDGGFGSEDG GGGSGESVLP EMGDDMDEEE
     DDEEEERGEG KEERSKLDEG YFEIEAIRRK RVRKGKVQYL IKWRGWPETA NTWEPLENLH
     SIADVIDSFE GSLKPGKPGR KKKRKYAGPH SQLKKKQQRL GYDAAEKSDS STSLNNSSLP
     GVRGPLDLSG YVAANNNQGE ANSGNVGMVR QVSLKEYDPT LNELRGPGGD NVRENGFLKV
     YPKEFDKDSR FIGAKRRKSG SVKRFKQDGT TPNNNNNNHT TTATTADHNL TPNLDSFGRM
     VEPHHNNNLS QKSRLEELDI VRIIQPVRFS SSITNNVQDA LVTFSALRSD GKEVTVDNRF
     LKAHNPLLLI EFYEQHLKYN PER
//
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