ID A0A0D3AR96_BRAOL Unreviewed; 553 AA.
AC A0A0D3AR96;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=SURP motif domain-containing protein {ECO:0000259|PROSITE:PS50128};
GN Name=106324616 {ECO:0000313|EnsemblPlants:Bo2g092730.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo2g092730.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo2g092730.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo2g092730.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013618011.1; XM_013762557.1.
DR AlphaFoldDB; A0A0D3AR96; -.
DR STRING; 109376.A0A0D3AR96; -.
DR EnsemblPlants; Bo2g092730.1; Bo2g092730.1; Bo2g092730.
DR GeneID; 106324616; -.
DR Gramene; Bo2g092730.1; Bo2g092730.1; Bo2g092730.
DR KEGG; boe:106324616; -.
DR eggNOG; KOG0007; Eukaryota.
DR HOGENOM; CLU_492918_0_0_1; -.
DR OMA; SRWEVEI; -.
DR OrthoDB; 673645at2759; -.
DR Proteomes; UP000032141; Chromosome C2.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.10.10.790; Surp module; 2.
DR InterPro; IPR045146; SF3A1.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR15316; SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; 1.
DR PANTHER; PTHR15316:SF1; SPLICING FACTOR 3A SUBUNIT 1; 1.
DR Pfam; PF01805; Surp; 2.
DR SMART; SM00648; SWAP; 1.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50128; SURP; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 159..199
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 312..354
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
SQ SEQUENCE 553 AA; 63529 MW; 91D31CD2D874B834 CRC64;
MTQFGGYDYC TEKAMQYLTL EPGKVPEALK LYAEAFQAKL VDDSYEDQSV QLKILNSYVL
ITPWVSASGS SDSFLELPTD LNSIRRIRED KRFVEIDRTS STENKRVMMK DPFGITFLLR
MEKKKMTRYV VDHGLLFRRA CNPIAFGFPQ GISPNDLCTI KLTALFVTRY GMGFRMALKK
IASTEFAFLN LNHIWRRLFF NFVGVYTSIV KPSEVVYRSC DFMGKALELF FHLLQLKNVK
MGGSRTVMEV DAFTGGVDYF AYMDFVGYSD VMPRPQRRSV MIAQLGHNTL RTPLSASWCT
TIFFVSPEVL GIIKLTALFV AWYGKRIACE LMEKVGRNPL FSFLDPSDCG FPCYNMVVKV
YSKVLKNFEL VYTADIVLQR YFQSLWDEEK DEPKDLDDLY SFVECVDSFA QMEDEEFFHK
MGCRQANLLR NSLIDHQAHV YPFHDQTSRV SFRDQNSPAN VQDEGPSSIK VCVPTLDGRV
IIEIIVESFF GEKVASLKEK IVKVLQIPSK YLKLRGKSVG VLRDDKSLAD NNVEAREILT
ATWRFSRWEV EIA
//
