ID   A0A0D3ATT9_BRAOL        Unreviewed;       977 AA.
AC   A0A0D3ATT9;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo2g120480.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo2g120480.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo2g120480.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3ATT9; -.
DR   EnsemblPlants; Bo2g120480.1; Bo2g120480.1; Bo2g120480.
DR   Gramene; Bo2g120480.1; Bo2g120480.1; Bo2g120480.
DR   eggNOG; ENOG502RJNC; Eukaryota.
DR   HOGENOM; CLU_304266_0_0_1; -.
DR   Proteomes; UP000032141; Chromosome C2.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   InterPro; IPR008395; Agenet-like_dom.
DR   InterPro; IPR018289; MULE_transposase_dom.
DR   InterPro; IPR006564; Znf_PMZ.
DR   InterPro; IPR007527; Znf_SWIM.
DR   PANTHER; PTHR31973:SF192; DBD_TNP_MUT DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR31973; POLYPROTEIN, PUTATIVE-RELATED; 1.
DR   Pfam; PF05641; Agenet; 1.
DR   Pfam; PF10551; MULE; 1.
DR   Pfam; PF04434; SWIM; 1.
DR   SMART; SM00575; ZnF_PMZ; 1.
DR   PROSITE; PS50966; ZF_SWIM; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT   TRANSMEM        78..96
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          901..935
FT                   /note="SWIM-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50966"
FT   REGION          298..335
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          490..555
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        304..335
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        497..555
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   977 AA;  110886 MW;  42A47F87E28DC074 CRC64;
     MRNDYGCEIS DSLARDSREY AVNAVRAFGQ SIRSFSKLTR LVIVVDESFL KSKFKGLTSG
     TPIYGKGVVI FKYPYDPTVA LVYLSAAFLL ACIVAGTQAF EVMYSVLFNI KLILLIMWDL
     LLSPMDETTF KRGEANLDQA AGTVDKKQTE ENIVQTLFEV GENVEIASGR KWYPGNVLKK
     DIRNGVEMVQ VEYSTLFQDK NKKIKRLQES VYSDRIRPQP PSEKPEETKS LELMDNVEAY
     HNDGWCNARR EPLDGSHTSP LSQQVETQDM NMMRDSIPEL LALPELKYPI GSEPKLKEPL
     DGSHASPLSQ QVETQVYSPN STQHVEKEPS NQAHAAQTQF FSTNVTQQEP LNESHLHLHC
     LNRLKLRFIL LTRHNTYVLK IEKEQLNEAP DVHTRKEIEP SLDEMPSNPI QEKKTLTIRL
     QKIVIEDFGF EETNADLELS YLPIGLINSS ECPPVIIGNS QQVQSFLGFC KKHQSTRLCV
     SSKAKQGNPN KVDIDLKLPT DASKHNEKKK WKMKQGEVDG DDYNADKHNE KKKGKMKQDE
     VDGDEYDANN INSEKENKEK LAKSPLVELV KIGDLFLNKT VLKARCSFGG VRAECLNGST
     YIITKKYIGE HSCAPSSKTS AGKTASAKMI CGLIMHKYEA RDSREYAVNA VRGIPQESYG
     IIQKCLHMLQ EANPVNSKGC YWLQLLYMEI QIQIQDSEND KSWEWFMRKL KVVVDDNGLA
     FISDRQRSIA KALENVYPLA RHGICIHHLL NNVVSQFKGR GLSGLISKAS KAYSVADFKK
     TFAHVCNISP EIGNYLIDAD VKKWARCQFL GYKYDIRTKS PAESINYALH SMREFPVIHL
     LDSIREMLTC LFFKRKKLIL KYTHPLTIDV EEKIDGRIEK GKTFVVYLVN DCQLLVKGDT
     IECFVDLDKW TCSCGKYDLL KIPCRHAIKA GFFVGREPHR LTDFLYTTGA WREAYQESIN
     PIAVSSRWLI CPTSATA
//