ID   A0A0D3B635_BRAOL        Unreviewed;       350 AA.
AC   A0A0D3B635;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 32.
DE   RecName: Full=Pre-mRNA-splicing factor 38 {ECO:0000256|RuleBase:RU367025};
GN   Name=106328505 {ECO:0000313|EnsemblPlants:Bo3g035100.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g035100.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo3g035100.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo3g035100.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- FUNCTION: Required for pre-mRNA splicing.
CC       {ECO:0000256|RuleBase:RU367025}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|RuleBase:RU367025}.
CC   -!- SIMILARITY: Belongs to the PRP38 family.
CC       {ECO:0000256|ARBA:ARBA00006164, ECO:0000256|RuleBase:RU367025}.
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DR   RefSeq; XP_013622413.1; XM_013766959.1.
DR   AlphaFoldDB; A0A0D3B635; -.
DR   STRING; 109376.A0A0D3B635; -.
DR   EnsemblPlants; Bo3g035100.1; Bo3g035100.1; Bo3g035100.
DR   GeneID; 106328505; -.
DR   Gramene; Bo3g035100.1; Bo3g035100.1; Bo3g035100.
DR   KEGG; boe:106328505; -.
DR   eggNOG; KOG2889; Eukaryota.
DR   HOGENOM; CLU_039466_1_2_1; -.
DR   OMA; GMELRYI; -.
DR   OrthoDB; 5485563at2759; -.
DR   Proteomes; UP000032141; Chromosome C3.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:UniProtKB-UniRule.
DR   InterPro; IPR005037; PRP38.
DR   InterPro; IPR024767; PRP38_C.
DR   PANTHER; PTHR23142:SF1; PRE-MRNA-SPLICING FACTOR 38A; 1.
DR   PANTHER; PTHR23142; UNCHARACTERIZED; 1.
DR   Pfam; PF03371; PRP38; 1.
DR   Pfam; PF12871; PRP38_assoc; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664,
KW   ECO:0000256|RuleBase:RU367025};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187,
KW   ECO:0000256|RuleBase:RU367025};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU367025};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Spliceosome {ECO:0000256|ARBA:ARBA00022728, ECO:0000256|RuleBase:RU367025}.
FT   DOMAIN          179..269
FT                   /note="Pre-mRNA-splicing factor 38 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF12871"
FT   REGION          182..350
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        185..200
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        201..293
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        300..336
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   350 AA;  42535 MW;  1C96996B765076FB CRC64;
     MANRTDPLAK NIRGTNPQNL VEKIVRTKIY NHTFWKEQCF GLTAETLVDK AMELDHVGGT
     FGGNRKPTPF LCLILKMLQI QPEKEIVVEF IKNDDYKYVR ILGAFYLRLT GSDVDVYRYL
     EPLYNDYRKV RQKLSDGRFS LTHVDEVIEE LLTKDYSCDI AMPRLKKRWT LEQNGLLEPR
     KSVLEDDFEE EEEKEENEGM ADGSEDEKDH YRRSPERERD RDRDRERRRD SHRHRDRDYD
     RDYDMDRDYE RERGRGRDRD RERDRDRDHY RDRDRERERG RDRDRERERA RRRSRSRSRD
     RKRHESDDRE EPKKKKEKKE KMKEDGTDHP DPEIAEANRL RASLGLKPLK
//