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Database: UniProt
Entry: A0A0D3B7T5_BRAOL
LinkDB: A0A0D3B7T5_BRAOL
Original site: A0A0D3B7T5_BRAOL 
ID   A0A0D3B7T5_BRAOL        Unreviewed;       686 AA.
AC   A0A0D3B7T5;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 35.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=106329557 {ECO:0000313|EnsemblPlants:Bo3g043080.1};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g043080.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo3g043080.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo3g043080.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   RefSeq; XP_013623697.1; XM_013768243.1.
DR   AlphaFoldDB; A0A0D3B7T5; -.
DR   STRING; 109376.A0A0D3B7T5; -.
DR   EnsemblPlants; Bo3g043080.1; Bo3g043080.1; Bo3g043080.
DR   GeneID; 106329557; -.
DR   Gramene; Bo3g043080.1; Bo3g043080.1; Bo3g043080.
DR   KEGG; boe:106329557; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_6_1; -.
DR   OMA; PEHYNCM; -.
DR   OrthoDB; 443921at2759; -.
DR   Proteomes; UP000032141; Chromosome C3.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 4.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          70..104
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          172..206
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          405..439
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          506..540
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   686 AA;  75833 MW;  178D2AD9172D33A2 CRC64;
     MAMDLKLIAA RLRHCGKLQA FKRGEYIQAQ LIKQGISNNV FLANNLISMH LECKSFVDAH
     KVFDEMTERN IVTWTTMVSG YTSDGKPNKA IELYRSMLDS ESEAPNEFLF SAVLKACGLV
     GDLQLGRLIH ERIGEENMKG DVVLMNGVLD MYVKNRRLRE ANKAFSEISQ PNLTSWNTLL
     SGYCKEGLVD EAVRLFHRIP QPNAVSWNCL ISGFVDKGSP RALEFLVMMH REGLKLDGFA
     LPCGLKACSF GGLLTMGKQL HCCVLKSGLQ SSSFVRSALI DMYSNCCSLS DAVDLFRQAK
     LHNTVAVSNS MLSGFLINDE NEAALRMLLQ MYQSGLSFDS YTLSGALKIC TNLINLRLGL
     QVHGLVVISG YELDYIVGSI LVDLHANVGN VQDAHRLFHR LSNKDIIAFS GLIRGCVKAG
     FYSLAFDLFG ELIKLGLDAD QFVISSILKA CSSLASLGWG KQVHGLCVKK GYESEPVTAT
     GLIDMYVKCG EIDNGVVLFD GMLERDVVSW TGIIVGCGQN GRAKEAIRYF REMIDSGVEP
     NEVTFYGVVS ACRHSGMLEE ARFILESMRS EYGLEPCVEH YYCVVDLLGQ AGRFQEAEEI
     IKGMPFEPDK TIWMSLLTAC GTHKNAELVT VIAEKLLNSF SEDPSVYTCI SNVYAAMGMW
     DRLGEVREAA KKLGTKESGL SWIDIA
//
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