ID A0A0D3B7T5_BRAOL Unreviewed; 686 AA.
AC A0A0D3B7T5;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 35.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=106329557 {ECO:0000313|EnsemblPlants:Bo3g043080.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g043080.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g043080.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g043080.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013623697.1; XM_013768243.1.
DR AlphaFoldDB; A0A0D3B7T5; -.
DR STRING; 109376.A0A0D3B7T5; -.
DR EnsemblPlants; Bo3g043080.1; Bo3g043080.1; Bo3g043080.
DR GeneID; 106329557; -.
DR Gramene; Bo3g043080.1; Bo3g043080.1; Bo3g043080.
DR KEGG; boe:106329557; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_6_1; -.
DR OMA; PEHYNCM; -.
DR OrthoDB; 443921at2759; -.
DR Proteomes; UP000032141; Chromosome C3.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 4.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 70..104
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 172..206
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 405..439
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 506..540
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 686 AA; 75833 MW; 178D2AD9172D33A2 CRC64;
MAMDLKLIAA RLRHCGKLQA FKRGEYIQAQ LIKQGISNNV FLANNLISMH LECKSFVDAH
KVFDEMTERN IVTWTTMVSG YTSDGKPNKA IELYRSMLDS ESEAPNEFLF SAVLKACGLV
GDLQLGRLIH ERIGEENMKG DVVLMNGVLD MYVKNRRLRE ANKAFSEISQ PNLTSWNTLL
SGYCKEGLVD EAVRLFHRIP QPNAVSWNCL ISGFVDKGSP RALEFLVMMH REGLKLDGFA
LPCGLKACSF GGLLTMGKQL HCCVLKSGLQ SSSFVRSALI DMYSNCCSLS DAVDLFRQAK
LHNTVAVSNS MLSGFLINDE NEAALRMLLQ MYQSGLSFDS YTLSGALKIC TNLINLRLGL
QVHGLVVISG YELDYIVGSI LVDLHANVGN VQDAHRLFHR LSNKDIIAFS GLIRGCVKAG
FYSLAFDLFG ELIKLGLDAD QFVISSILKA CSSLASLGWG KQVHGLCVKK GYESEPVTAT
GLIDMYVKCG EIDNGVVLFD GMLERDVVSW TGIIVGCGQN GRAKEAIRYF REMIDSGVEP
NEVTFYGVVS ACRHSGMLEE ARFILESMRS EYGLEPCVEH YYCVVDLLGQ AGRFQEAEEI
IKGMPFEPDK TIWMSLLTAC GTHKNAELVT VIAEKLLNSF SEDPSVYTCI SNVYAAMGMW
DRLGEVREAA KKLGTKESGL SWIDIA
//