ID A0A0D3BID4_BRAOL Unreviewed; 1419 AA.
AC A0A0D3BID4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=GYF domain-containing protein {ECO:0000259|PROSITE:PS50829};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo3g141450.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo3g141450.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo3g141450.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR STRING; 109376.A0A0D3BID4; -.
DR EnsemblPlants; Bo3g141450.1; Bo3g141450.1; Bo3g141450.
DR Gramene; Bo3g141450.1; Bo3g141450.1; Bo3g141450.
DR eggNOG; KOG1862; Eukaryota.
DR HOGENOM; CLU_003968_0_0_1; -.
DR OMA; GHDNVQM; -.
DR Proteomes; UP000032141; Chromosome C3.
DR CDD; cd00072; GYF; 1.
DR Gene3D; 3.30.1490.40; -; 2.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR PANTHER; PTHR46992; GYF DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46992:SF4; GYF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02213; GYF; 2.
DR SMART; SM00444; GYF; 2.
DR SUPFAM; SSF55277; GYF domain; 2.
DR PROSITE; PS50829; GYF; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 333..376
FT /note="GYF"
FT /evidence="ECO:0000259|PROSITE:PS50829"
FT DOMAIN 486..537
FT /note="GYF"
FT /evidence="ECO:0000259|PROSITE:PS50829"
FT REGION 1..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1309..1401
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 705..752
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 16..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 61..75
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1314..1368
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1419 AA; 156727 MW; B581061B14A48C37 CRC64;
MDVRSPAPVP IGSRRRDNKW SSRWGPDDKE KEKDAKVGYN NKDNKEEVQI ETQSVLGSSL
RESDTRDKWR PRHRMEQLQS GGPTSYRAAP GFGLDKGRSE GRSEGPNIGF TVGRGRARGT
WSAFFGAGGF LRNESVPGKP APTCRYVRGK LLDLYRNQKP DKIPIDMEEV DSVTQVALIE
PLAFITPDVE EEESLKGIWK GRITGSEAHT SPGEESLAEK SLGETKVDGS LLGVVSGDSV
SMHNSNSGIV LYILTQIQTT VAVGLLGSNG GGLWGASESD KVSHGSLEAV RSAFTKSSML
DAGEPLVEQD YTGKLQQPDI EVNHSEGTLP PEEFMFSYID PQGVIQGPFI GSDIISWFEQ
GFFGTDLESL AEKSLGETKV DGSLLGVVSG DSGSMHNSNS GIVLYILTQI QTTVAVGLLG
SNGGGLWGAS ESDKVSHGSL EAVRSAFTKS SMLDAGEPLV EQDYTGKLQQ PDIEVNHSEG
TLPPEEFMFS YIDPQGVIQG PFIGSDIISW FEQGFFGTDL QVRLATAPEG TPFQDLGSVM
SYLKTESMQA HINDQISELE ETSRKTNSEI GLSFAPVAES NGSASGHDNV QMKPPHVDDR
SFLDYSAQDE EIVFPGRAGV SGYGSAKSST SMHDALMGVS GHSAVPVESA KVATQNQNEN
KLHPFGVLWS ELESSSTPVD LLPNRSYDTG HDQKHLDQGQ DLDHLLTLKL QQQQQQQQKI
QLQQQQKIQL QQRQLEQEYQ LQQKLLQEQQ QSHARNLHFQ QILQGQTPDS RIGQSHDFPR
FNNVDQMLLE QQLMDELQSS GHRSQNFTPY MEQLAAGNFG QLPHEGHQNE LLLEQLLSEQ
MQSQYRQMRS QHGHMQSEPL RSLEYQLLQQ DQLMRLANGG RQNTVLEELR HIDPQHGQLQ
SEPIRSLEYQ MMQQEQLMLL ANRARHNTLL EEHRHIDPLW PSNRNDQLLG AHPGIHRSHS
SAGFRPVDFH QQQQRPPFED HFSHLERNLS YQQQLNQELF EQGLPFERST SLPRNTSGLN
LDAGRGLNLS ELRDAQMQSS GRLGNSTPGF SHQNPHTQLG EPHFSEMEPR KERWHGADTQ
LAGGWAETQF HRPNTEADHH KMRSEMRRVG EDSNSWMVDG HTDEKSKQLF MELLHQRPGH
QPLESPSMNR GEPYDMMAAS GFGFADHGGR QNASSSFGSH ASSDEHVNGL PGDGNYMGSL
QRNNSLLSGS IDGGRKNETK DFSNMLGMSK DANDIRTWNN APPKKEGAGL MSFEAQDRMG
KQAVMDSLFQ GEVPVATLGR QSSSSISESY SDNLVGEVRK DRLVVPSHGQ VSVLLKRPPS
SHSSSSHEGL LEQMSDAANR TAVGNKGSKA SFSEMLKNSS SSSIMKKVAA EPSSDPNEGN
KGGGGKKKGK KGRQLDPALL GFKVTSNRLM GEIHRADDF
//