ID A0A0D3BR82_BRAOL Unreviewed; 364 AA.
AC A0A0D3BR82;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=diaminopimelate epimerase {ECO:0000256|ARBA:ARBA00013080};
DE EC=5.1.1.7 {ECO:0000256|ARBA:ARBA00013080};
GN Name=106339351 {ECO:0000313|EnsemblPlants:Bo4g030580.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo4g030580.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo4g030580.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo4g030580.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2S,6S)-2,6-diaminoheptanedioate = meso-2,6-
CC diaminoheptanedioate; Xref=Rhea:RHEA:15393, ChEBI:CHEBI:57609,
CC ChEBI:CHEBI:57791; EC=5.1.1.7;
CC Evidence={ECO:0000256|ARBA:ARBA00000599};
CC -!- PATHWAY: Amino-acid biosynthesis; L-lysine biosynthesis via DAP
CC pathway; DL-2,6-diaminopimelate from LL-2,6-diaminopimelate: step 1/1.
CC {ECO:0000256|ARBA:ARBA00005196}.
CC -!- SIMILARITY: Belongs to the diaminopimelate epimerase family.
CC {ECO:0000256|ARBA:ARBA00010219}.
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DR RefSeq; XP_013633596.1; XM_013778142.1.
DR AlphaFoldDB; A0A0D3BR82; -.
DR STRING; 109376.A0A0D3BR82; -.
DR EnsemblPlants; Bo4g030580.1; Bo4g030580.1; Bo4g030580.
DR GeneID; 106339351; -.
DR Gramene; Bo4g030580.1; Bo4g030580.1; Bo4g030580.
DR KEGG; boe:106339351; -.
DR eggNOG; ENOG502QQKJ; Eukaryota.
DR HOGENOM; CLU_053306_2_1_1; -.
DR OMA; EIRIWER; -.
DR OrthoDB; 472077at2759; -.
DR UniPathway; UPA00034; UER00025.
DR Proteomes; UP000032141; Chromosome C4.
DR GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR GO; GO:0008837; F:diaminopimelate epimerase activity; IEA:UniProtKB-EC.
DR GO; GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:UniProtKB-UniPathway.
DR HAMAP; MF_00197; DAP_epimerase; 1.
DR InterPro; IPR018510; DAP_epimerase_AS.
DR InterPro; IPR001653; DAP_epimerase_DapF.
DR NCBIfam; TIGR00652; DapF; 1.
DR PANTHER; PTHR31689:SF0; DIAMINOPIMELATE EPIMERASE; 1.
DR PANTHER; PTHR31689; DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC; 1.
DR Pfam; PF01678; DAP_epimerase; 2.
DR SUPFAM; SSF54506; Diaminopimelate epimerase-like; 2.
DR PROSITE; PS01326; DAP_EPIMERASE; 1.
PE 3: Inferred from homology;
KW Amino-acid biosynthesis {ECO:0000256|ARBA:ARBA00022605};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Lysine biosynthesis {ECO:0000256|ARBA:ARBA00023154};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
SQ SEQUENCE 364 AA; 39835 MW; D5F3BED7213F8E60 CRC64;
MEIAATRTLT LSPPQSRQFS HTFFSKNLGS LPSLRFNLSG RRNFSFKSTN LRVSATSMSA
FAAQKLSPET FLDKKESGIL HFVKYHGLGN DFILVDNRDS SEPKIAQEQA VKLCDRNFGV
GADGVIFAMP GVNGTDYTMR IFNSDGSEPE MCGNGVRCFA RFIAEIENLQ GKHSFTIHTG
AGLIIPEIQD DGQVKVDMGE PILRAEDVPT RLQGNKGESV VAAELVVDGV SWNVTCVSMG
NPHCITFGTK DGQDLRVDEL KLSEIGPKFE HHEMFPARTN TEFVEVLSRS HLKMRVWERG
AGATLACGTG ACALVVAAVL EGRTDRKCTV DLPGGPLEIE WKEEDNHIYM TGPADLVFYG
SALL
//
