ID A0A0D3C014_BRAOL Unreviewed; 961 AA.
AC A0A0D3C014;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo4g139610.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo4g139610.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo4g139610.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3C014; -.
DR EnsemblPlants; Bo4g139610.1; Bo4g139610.1; Bo4g139610.
DR Gramene; Bo4g139610.1; Bo4g139610.1; Bo4g139610.
DR HOGENOM; CLU_001561_0_2_1; -.
DR OMA; KIHATRT; -.
DR Proteomes; UP000032141; Chromosome C4.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR011713; Leu-rich_rpt_3.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11017:SF384; DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) FAMILY; 1.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF07725; LRR_3; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 7..171
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 961 AA; 109446 MW; 87969CDB073B7C95 CRC64;
MASSSASKYD VFLTFRGEDT RHSIVSHLYA ALTRRGLFTF KDDKKLEIGD RISEELRRAI
QGSDFVVVVL SEKYATSRWC LMELQLIMEL QREGRLSVFP VFYKVEPSSV RHQLRSFDLE
RYQRDPVMAK NIPMWREALN QITGLSGMES RRCVDEATMV EKIARDISRR KTLMRNIDSK
HIVGVETHMQ GLKSLLDMDS ENYEVRMIGI WGMGGIGKTT IAKCLYDQLS FQFEATYFTQ
DIKGIHKGHD LINLQKKLLV YNTLGDDISL WSVEAGREEI KARLGNHKVL LVLDGVDKIE
QVHALAKETS WFGPRSRIII TTRDRGLLRS CGVKTIYEVK CLDDKGSMQM FKQIAFEGRS
PPCDDFEQLS LRAVRLAHGL PSAIKAYALF LRARDNSLEE WEEAVCGLES ATDENIMEIL
KLSYDGLAKK HQNVFLQVAC LFNGETYQRI ITLLDGSGHE RNLCIRVLAE RSLISITTNG
YVILHKLVEQ MGRGIMLDCQ NFIGDPEKVV AALVHGEGTE QTECISLHTC EMTCALSLKK
SVFELMYKLK FFKVYKHVND IESRLQVTTD DDYLCMPCNL KLFHWDAFPL TTLPLKAGSY
FLVELNLRYS NLETLWNEKL DFENLKKLDV TGSKNLKQLP DLSDVKNLEE LILEQCTRLE
GVPESIGYYK PTLRRLVLSY YGGPESPMRV VVRRKVTQSS TTLEFPTAEV RMKLGDITIA
GDVIFHFSSS CQGNAEYFSL SSSEQHSPVQ QAPRVISEFN KFETLNIRRF SYEENGRPVT
FHSFPNLLKH SKVLDLSGND FKNLPSNITI LPRLRTLWLR NCGKLEELPE LAQVQSLTLS
NCRNLRSLVK RSDSGSYCLL ELSLDNCNNV GSLSDQLSQF NKLTYLDLSS HDFETLPSSI
SDLTSLVTLC LNNCKKLKSV EEVPPSLQFL DAQGCDSLEA NALEIFRERL NKKVNVLPLR
P
//
