ID A0A0D3C7U8_BRAOL Unreviewed; 1603 AA.
AC A0A0D3C7U8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo5g005670.1};
GN Name=106343240 {ECO:0000313|EnsemblPlants:Bo5g005670.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g005670.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g005670.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g005670.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_013637850.1; XM_013782396.1.
DR RefSeq; XP_013637851.1; XM_013782397.1.
DR RefSeq; XP_013637853.1; XM_013782399.1.
DR STRING; 109376.A0A0D3C7U8; -.
DR EnsemblPlants; Bo5g005670.1; Bo5g005670.1; Bo5g005670.
DR GeneID; 106343240; -.
DR Gramene; Bo5g005670.1; Bo5g005670.1; Bo5g005670.
DR KEGG; boe:106343240; -.
DR eggNOG; KOG0390; Eukaryota.
DR HOGENOM; CLU_244196_0_0_1; -.
DR OMA; HCGFVER; -.
DR OrthoDB; 391749at2759; -.
DR Proteomes; UP000032141; Chromosome C5.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR GO; GO:1900370; P:positive regulation of post-transcriptional gene silencing by RNA; IEA:EnsemblPlants.
DR CDD; cd18007; DEXHc_ATRX-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR PANTHER; PTHR45821:SF6; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 3; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 1047..1253
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1399..1559
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 15..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..161
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 308..517
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 554..621
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 678..803
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 828..851
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 962..992
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..33
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 55..72
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 145..161
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 309..341
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 367..385
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 399..449
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..482
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..517
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 678..693
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 764..781
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 828..849
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 962..979
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1603 AA; 180825 MW; 01870D97F4784A79 CRC64;
MDWIGSRIKF RNKERLEEVK KRKPAEEEAH VSSRRKRKRK RRRRDHDSDL EDITETYHNN
NNLSADVTQS KSSGSVRRRR RRKDHDSDIE DITETYHKDH DSDLVDDTET YNTDHDSDLV
DVTVTYNNNL PAEVTDNNFS DSGGVKRTES EHNMEEEEKE GLFSVRVEEV DTSVPGPSGL
SIKDKLLSDE VLDLDVAKTV TDENLDLDMV KSAPSLPDEV LGLDVIKTVP ELSDEIPDLD
VIKSVPSSSS ESSIQQKLCD EIMDVIRSAA SSSESSIKEK LSEEIMDVDV VKSVPKLSND
ILVEDVVKSV PSSSGSSNKG NESLDSDVVK SVTSSSGSEE NIKDKCSSEV RGVEAAKPVP
TEIEIISDSE SETKHSAKKK LSFAECSRVL DSTSESSEEE GASEANNNAK DDVTVESLSS
SSSSSSSSSS SSALSLSSSS SSSSSEDEVS SKEVVGESDD DDCRKASSPI RKVSEVRRKP
LGRYKRAGPS SITPRKQLLK IRKLNHPEEE EEEDRFQAKP VKEFKRIQKL NLQEEEEEDR
FQAKPVQEFK RLQKVNRQKE EDDRFQAKPV KEFKRIQKVN RPEEEEDRFQ TKPRNEDKTL
QKLNLQEEEE DRFQDKPRNE DRRIQKFHCP EEGQQHKEVE RVTKEHSNVV FTCVHCSKEN
TGIFDSDSCC FRPHAITRGE EDADDDDLNK NDYVPPEKPS TSRPETENPK EVITPARLST
SKPETVKAKE IQAPEMPSRQ FSLKTSMPVT AAEGLATPAL VNEPVDNESA SSISSGDESG
YESEPSLKEK EAAKSNNNSG WRMLDGSRKE VDLFRLLVNS VRENDRLGEE EEDDILVSSP
EEEQPEEQDE RKYDADGLLI IRPPPLVEMF GMVEPAPPVV SEAQIEEDKM WEEVAFYTNA
NEVDLQLQSE IEKEISADDS PGAACRQGNH ELCLDLEIGL KCIHCCFVLR EIRGLDVSEW
GERNTSGRRK NDRSEEEENS NNIIGSLEFE ANGNNNNLKE GCESTQGTVW DKIPGVKSQM
YPHQQEGFEF IWRNLAGTIM LNELEDFENS EETGGCIMSH APGTGKTRLT IIFLQSYLEC
FPNCKPVIIA PASLLLTWAE EFKKWNISIP FHNLSSLEFT GRENSAASKL LMQKNSSARS
NNEIRMVKIY SWIKSKSILG ISYNLYEKLA GVKDEDKKTK GKPDKELEDI REILMDVPGL
LVLDEAHTPR NQRSCIWKTL SKVETQKRIL LSGTPFQNNF LELGNVLGLA RPKYLERLMS
TLKKSGMTVT KRGKKALGDK INNRGIEELK AVMLPFVHVH KGSILQKSLP GLRECVVVLN
PPDLQRKVLE SIEVTHNQKT KNVFETEHKL SLVSVHPSLV SHCKLTGKES LTIDEALLAQ
LKKVRLDPNQ SVKTRFLMEF IKLCVVIKEK VLVFSQYIDP LKLIMKHLVN WFKWTEGEEV
LYMHGKLEQK QRQTLINEFN DPKSKAKVLL ASTKACSEGI NLVGASRVIL LDVVWNPAVE
RQAISRAYRI GQKRIVYTYH LVAKGTPEGT KYCKQAQKDR ISELVFACSS RPDKGKEKIA
EAVTEDKVLD TMVKHLNLGD MFDNLIVQPK EADLVEGFSI LMP
//
