ID A0A0D3CD05_BRAOL Unreviewed; 1207 AA.
AC A0A0D3CD05;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo5g041570.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g041570.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo5g041570.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo5g041570.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3CD05; -.
DR STRING; 109376.A0A0D3CD05; -.
DR EnsemblPlants; Bo5g041570.1; Bo5g041570.1; Bo5g041570.
DR Gramene; Bo5g041570.1; Bo5g041570.1; Bo5g041570.
DR eggNOG; KOG1823; Eukaryota.
DR HOGENOM; CLU_001723_1_0_1; -.
DR OMA; IMANIVH; -.
DR Proteomes; UP000032141; Chromosome C5.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR046523; UTP20_C.
DR InterPro; IPR011430; UTP20_N.
DR PANTHER; PTHR17695:SF11; SMALL SUBUNIT PROCESSOME COMPONENT 20 HOMOLOG; 1.
DR PANTHER; PTHR17695; UNCHARACTERIZED; 1.
DR Pfam; PF20416; UTP20_C; 1.
DR Pfam; PF07539; UTP20_N; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 22..155
FT /note="U3 small nucleolar RNA-associated protein 20 N-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF07539"
FT DOMAIN 348..565
FT /note="U3 small nucleolar RNA-associated protein 20 C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20416"
FT REGION 573..595
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1162..1207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1162..1181
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1182..1201
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1207 AA; 137175 MW; A0002533D4930B5B CRC64;
MEMNKLMETI FGEIVSPLLV DAEPDVRLCI CNLLESLAKI DFSLYRVAKC VSDMNATSPM
EVDDLDYETI MDAYANIDVD FFNESSEQHM MIILSQSLYN MTSKEVMLKD CASSLLCQEA
SAHSDSGKEV SKSVARWTGD RVLWIMNKFI LKHIGDAVNN GISSGKGEIL LIRKMVMSLP
DSGNLAAFRP LCSENDDLDF FKNVFNIQAH RRAKAINSFA KEIKDSSLPE GVVRKLLVSI
FFNMLLDGQE RKGQDSKGRV EKGQNSKDEN VLDACEEALA SLSAHMSWNL YYALLNRCFQ
EMKRLWNLVC LILDKFHFAK GGEAHEEIRG CLEKTLYPKI TKLFDSESDG VNFNAYVAAV
KVLKLLPKEI MDSNIDSLVN KLSNFLRDPM ESTREGARKA LAACLKELGL ENYLQLVVKK
LVSLLTKGSE VHVLGYTVHH ILSKCLPSPT GWKLDHCLED LDVVEADILG DVDEQKEDKK
DSIRRRKKKK ETIKHKSLDP LRLIAENVTC RSHALTLLSP VTKQLQGPMT SKLKSTLTDM
LKHIAIGLEG NPSVDQGDLF CFIYHRVDDN KSGLRGQKSS QPSKKKRKSR RIQDTSGAKS
CPYLITVFAL DLLHNRLNRI QPNNTNEELV SKLDPFVKLL VGCLSSVYEE DVVSSSNKCF
TALLRLQLPS FKSEAREVKT KVLAIAQSAV SSSSTLVQSC LKLLTALVSN DNFKLSSEEL
KMLIQFRMCS DLESDSSVAS LSLLKAIVRK KLKVSKIYDV VDQVSRLMIT HQDKSIRNKC
GDILVEFLVN YASSEKRLEG HFNFLQKNLS CEHSTGREAV LDVLQKLIHK FPDPNPGKQS
KPSVGHQSVV GQQSQNLFIE LALHLEREND QKLLAKICDV MKLLIGCMTN YKSSLKLSLG
WYKLENSRVR GAKVLGLFIE AEKKFPEKKC SILLKEAKTI LESAVKLQNT VDEGSIPLWK
EAYYSLVMIE KMLKQFPHLC FHEDSQEDFK LLLHRHEWLQ TTTCRLLNYY FKKLAKSTEV
LLKLKVDRNR VVNKNNDTTE EDYLRENIVF AVTGLHSMIG QTDDEYSSSL DSDEQGKFME
AFLVFDSGKM RIVFNVYKEC ASNLNQEECR LYAFRILLPL YKVCQGFTGK AITDELEQLA
EEMLVKVYSE IKKSLEVKRQ KRRREEKEMA VVNPERNAKR KLKVASKNKA NKKRRIMRSK
MDRWSRS
//