ID   A0A0D3CK14_BRAOL        Unreviewed;       315 AA.
AC   A0A0D3CK14;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 27.
DE   RecName: Full=Reverse transcriptase zinc-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo5g127550.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo5g127550.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo5g127550.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3CK14; -.
DR   EnsemblPlants; Bo5g127550.1; Bo5g127550.1; Bo5g127550.
DR   Gramene; Bo5g127550.1; Bo5g127550.1; Bo5g127550.
DR   eggNOG; KOG1075; Eukaryota.
DR   HOGENOM; CLU_000680_14_0_1; -.
DR   Proteomes; UP000032141; Chromosome C5.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR026960; RVT-Znf.
DR   PANTHER; PTHR34146:SF3; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR   PANTHER; PTHR34146; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR   Pfam; PF13456; RVT_3; 1.
DR   Pfam; PF13966; zf-RVT; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          3..49
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
FT   DOMAIN          158..261
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|Pfam:PF13456"
SQ   SEQUENCE   315 AA;  36342 MW;  F50FFAE8025EDE3B CRC64;
     MQLLTGHVAV TRNLARRNIR CDNYCPRCGD LDESVTHAIF ECPPALQAWP LSTTPTSPEV
     FPLPSVYANM DYLFWRKNSI IEPEQDRDPF PWIIWYIWKA RNDKLFKGID RDPLELVRYA
     ESECQAWFAA NDVAQPMVQE TNIGNPQVIS LGNICLLDGS WTTSANFSGL GWVWMDNTGN
     TQLMGMKNLP RRESALHSEV EALRWTMENM LQHSTCQRFG TNCKELIAML DDPHAWPSFA
     TELERIETLR ICFPEFSITH SPVLVAGKMK RNRALTVRSF DQGCGVFKKK TVWVYLFAFR
     VCVSWTLHAR KIRYL
//