ID A0A0D3D0F6_BRAOL Unreviewed; 981 AA.
AC A0A0D3D0F6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN Name=106300648 {ECO:0000313|EnsemblPlants:Bo6g118010.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo6g118010.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo6g118010.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo6g118010.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_013592296.1; XM_013736842.1.
DR AlphaFoldDB; A0A0D3D0F6; -.
DR STRING; 109376.A0A0D3D0F6; -.
DR EnsemblPlants; Bo6g118010.1; Bo6g118010.1; Bo6g118010.
DR GeneID; 106300648; -.
DR Gramene; Bo6g118010.1; Bo6g118010.1; Bo6g118010.
DR KEGG; boe:106300648; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_011648_0_0_1; -.
DR OMA; LPVVMKM; -.
DR OrthoDB; 1218644at2759; -.
DR Proteomes; UP000032141; Chromosome C6.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR033443; PPR_long.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR45613:SF70; OS07G0472100 PROTEIN; 1.
DR PANTHER; PTHR45613; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 2.
DR Pfam; PF17177; PPR_long; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 13.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 142..176
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 177..211
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 294..328
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 329..363
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 364..398
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 502..536
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 515..622
FT /note="Pentacotripeptide-repeat region of PRORP"
FT /evidence="ECO:0000259|Pfam:PF17177"
FT REPEAT 537..571
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 572..606
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 607..641
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 642..672
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 713..747
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 748..782
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 852..886
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 56..78
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 952..981
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 56..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 960..981
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 981 AA; 109843 MW; 6C743A0A1DEC1532 CRC64;
MLHSNCYRHY TSSRDVPSSS SFLTSRSRVS PSPSPPLPLS LPWNFSPKLS TRFQLHCSSS
SSSPPRCSKP NSSSHRRRYG GVIPSILRSL SSSADIETTL TSLCLNLTPK EQTVLLKEQT
RWDLTLRVFR FFQRHHQGYS PNVIHYNIVL RALGRAAKWD ELRLCWIEMS RSGVLPTNNT
YGMLVDVYGR AGLVKEALLW IKHMEQRMHF PDEVTMATVV RVLKNSNEFE PADRFFKGWC
EGRVVLDLDS IDDDDDDPMN LKQFLSMELF KVGARGPVER RSDSSSSPRR KPRLTSTFNA
LIDLYGKAGR LEDAASLFSE MLKSGVAVDT VTFNTMIHIC GTHGRLSEAE ALLKKMEEKG
VNADTKTYNI LLTLHAGSGD IEAGLRYYRK IRRVGLFPDT VTHRAVLHVL CQRKMVAEVE
DVLSEMYMNS IRVDEHSVPV IMEMYVNEGM IGKAKALFER FQLDCVLSST TLAAVIDVYA
EKGLWVEAES VFYGKRRSVM NDVLVYNVMI KAYGMAKLHE KALSLFKGMK NQGTWPDECT
YNSLVQMLSG ADLVDEAQRV LSEMVDSGCK PGCKTFSSLI ASYVRLGLMS DAVDVYEGMR
KAGVKPNEVV YGSLINGFAE SGMVEEAIQY FKTMEEDGVK SNHIVLTSLI KAYSKVGCLE
EARRVYDRMK KDSEGGGPDV AASNSMLSLC AELGMVSEAE TIFNDLREKG TCDVITFATM
MYLYKGMGML DEAIEVAEEM RESGLLNDSV SFNQVMACYA ADGQLRECCE LFREMLVERK
LSLDWGTFKT VFTLLKKGGV PREAVEQLQA AYNEGKPLAT SAITATLFSA MGLYAYAMDS
CKEVTRDEIP LEHYAYNAVI YAYGASGEVD MALKAYMRMQ EKGLKPDIVT QAYLVGVYGR
AGMVEGVKRV HGWITFGEIE ANQSLFRAVR DAYVSANRQD LADVVKKEMS IAFEDGQEEE
YSSISGEGEE EEDESEEDDE F
//
