ID A0A0D3DBF1_BRAOL Unreviewed; 451 AA.
AC A0A0D3DBF1;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-NOV-2023, entry version 20.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g087060.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo7g087060.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo7g087060.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3DBF1; -.
DR EnsemblPlants; Bo7g087060.1; Bo7g087060.1; Bo7g087060.
DR Gramene; Bo7g087060.1; Bo7g087060.1; Bo7g087060.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_018037_0_0_1; -.
DR Proteomes; UP000032141; Chromosome C7.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR35046:SF9; REVERSE TRANSCRIPTASE; 1.
DR PANTHER; PTHR35046; ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN; 1.
DR Pfam; PF13650; Asp_protease_2; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 250..265
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 218..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 451 AA; 52014 MW; 6835192A23F0804A CRC64;
MAPRPGKEPA NDWTHFQQFL EDFQENFHDE IRRTLAESIQ AGVQAGVQAA LTANAANAVN
APIAHPPQRQ HHNHNLVFEE HEDDDVDNPF EDQLRHQQYH RQHHHDNAPR WTSGLKIDIP
EFHGGSQPED LLDWFVAVDE FIEFKEVPEQ KRVPLVATRF RRHAAAWWSQ LKLSRTRRGK
EKISSWEKLK KHMRKTFIPY NFERLLFQKF HNICQGSRRD TTHNTRNNPR ATDNITTNVD
ARPSRPNALR CFTCGERGHI QTACPTLGRR GLLASDKEIN GYHIYDDEDE KLEELDEEQV
AWDTGTMLML RRNCFAPKTS EAWQQMSLFS STCTVKGKVC RFVVDSGCSA NVVSEEAVRK
LALTAEAHRH PYCLLWMQTG AEVFVSQRTP VTLSIGSFYK DTLYCDIAPM DVSHIILGRP
WQVGRSCCFP HLKRTSRLAP TSNKRNPSRT F
//