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Database: UniProt
Entry: A0A0D3DBF1_BRAOL
LinkDB: A0A0D3DBF1_BRAOL
Original site: A0A0D3DBF1_BRAOL 
ID   A0A0D3DBF1_BRAOL        Unreviewed;       451 AA.
AC   A0A0D3DBF1;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 20.
DE   RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g087060.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo7g087060.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo7g087060.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3DBF1; -.
DR   EnsemblPlants; Bo7g087060.1; Bo7g087060.1; Bo7g087060.
DR   Gramene; Bo7g087060.1; Bo7g087060.1; Bo7g087060.
DR   eggNOG; KOG0017; Eukaryota.
DR   HOGENOM; CLU_018037_0_0_1; -.
DR   Proteomes; UP000032141; Chromosome C7.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   CDD; cd00303; retropepsin_like; 1.
DR   Gene3D; 2.40.70.10; Acid Proteases; 1.
DR   Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR005162; Retrotrans_gag_dom.
DR   InterPro; IPR001878; Znf_CCHC.
DR   InterPro; IPR036875; Znf_CCHC_sf.
DR   PANTHER; PTHR35046:SF9; REVERSE TRANSCRIPTASE; 1.
DR   PANTHER; PTHR35046; ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN; 1.
DR   Pfam; PF13650; Asp_protease_2; 1.
DR   Pfam; PF03732; Retrotrans_gag; 1.
DR   Pfam; PF00098; zf-CCHC; 1.
DR   SMART; SM00343; ZnF_C2HC; 1.
DR   SUPFAM; SSF50630; Acid proteases; 1.
DR   SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR   PROSITE; PS50158; ZF_CCHC; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW   Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT   DOMAIN          250..265
FT                   /note="CCHC-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50158"
FT   REGION          218..238
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   451 AA;  52014 MW;  6835192A23F0804A CRC64;
     MAPRPGKEPA NDWTHFQQFL EDFQENFHDE IRRTLAESIQ AGVQAGVQAA LTANAANAVN
     APIAHPPQRQ HHNHNLVFEE HEDDDVDNPF EDQLRHQQYH RQHHHDNAPR WTSGLKIDIP
     EFHGGSQPED LLDWFVAVDE FIEFKEVPEQ KRVPLVATRF RRHAAAWWSQ LKLSRTRRGK
     EKISSWEKLK KHMRKTFIPY NFERLLFQKF HNICQGSRRD TTHNTRNNPR ATDNITTNVD
     ARPSRPNALR CFTCGERGHI QTACPTLGRR GLLASDKEIN GYHIYDDEDE KLEELDEEQV
     AWDTGTMLML RRNCFAPKTS EAWQQMSLFS STCTVKGKVC RFVVDSGCSA NVVSEEAVRK
     LALTAEAHRH PYCLLWMQTG AEVFVSQRTP VTLSIGSFYK DTLYCDIAPM DVSHIILGRP
     WQVGRSCCFP HLKRTSRLAP TSNKRNPSRT F
//
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