GenomeNet

Database: UniProt
Entry: A0A0D3DDY6_BRAOL
LinkDB: A0A0D3DDY6_BRAOL
Original site: A0A0D3DDY6_BRAOL 
ID   A0A0D3DDY6_BRAOL        Unreviewed;       263 AA.
AC   A0A0D3DDY6;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 20.
DE   RecName: Full=hAT-like transposase RNase-H fold domain-containing protein {ECO:0000259|Pfam:PF14372};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g100860.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo7g100860.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo7g100860.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; A0A0D3DDY6; -.
DR   STRING; 109376.A0A0D3DDY6; -.
DR   EnsemblPlants; Bo7g100860.1; Bo7g100860.1; Bo7g100860.
DR   Gramene; Bo7g100860.1; Bo7g100860.1; Bo7g100860.
DR   eggNOG; KOG1121; Eukaryota.
DR   HOGENOM; CLU_009123_12_0_1; -.
DR   OMA; IKIRECI; -.
DR   Proteomes; UP000032141; Chromosome C7.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   PANTHER; PTHR46481:SF4; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 39; 1.
DR   PANTHER; PTHR46481; ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4; 1.
DR   Pfam; PF14372; hAT-like_RNase-H; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   DOMAIN          216..263
FT                   /note="hAT-like transposase RNase-H fold"
FT                   /evidence="ECO:0000259|Pfam:PF14372"
SQ   SEQUENCE   263 AA;  29838 MW;  B34A9C343A6C77DE CRC64;
     MGYICITAHF IDENWRLNNK ILAFCNLKPP HSGEEIAKAV YDCLKGWGLE KKVFTITLDN
     AKANDSMLNI LKHRLLSSNG SSNGLLCNGK FLHVRCSAHI LNLIVKAGLE LATSLIENIR
     ESVKFVKASE SRKDSFAICV ESAGITSGAG LSLDVSTRWN STYEMLARAL KFREAFAILN
     LYERGYKWLP SEEEWERGVK ICDLLKPFNT ISTYFSGVKY PTANVYFIQV WKIEMMLKKY
     ADCEDDGDVR TMARAMQKKF AKY
//
DBGET integrated database retrieval system