ID A0A0D3DQ21_BRAOL Unreviewed; 259 AA.
AC A0A0D3DQ21;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=Late embryogenesis abundant protein LEA-2 subgroup domain-containing protein {ECO:0000259|Pfam:PF03168};
GN Name=106307803 {ECO:0000313|EnsemblPlants:Bo8g067350.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g067350.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g067350.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g067350.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013600319.1; XM_013744865.1.
DR AlphaFoldDB; A0A0D3DQ21; -.
DR STRING; 109376.A0A0D3DQ21; -.
DR EnsemblPlants; Bo8g067350.1; Bo8g067350.1; Bo8g067350.
DR GeneID; 106307803; -.
DR Gramene; Bo8g067350.1; Bo8g067350.1; Bo8g067350.
DR KEGG; boe:106307803; -.
DR eggNOG; ENOG502QPUX; Eukaryota.
DR HOGENOM; CLU_051752_4_0_1; -.
DR OMA; MTDDKVY; -.
DR OrthoDB; 943489at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR InterPro; IPR004864; LEA_2.
DR PANTHER; PTHR31234; LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY; 1.
DR PANTHER; PTHR31234:SF2; OS05G0199100 PROTEIN; 1.
DR Pfam; PF03168; LEA_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 57..83
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 118..223
FT /note="Late embryogenesis abundant protein LEA-2 subgroup"
FT /evidence="ECO:0000259|Pfam:PF03168"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 259 AA; 27601 MW; 6403A23D13050C6A CRC64;
MTDDRVYPAS KPPGVAGATA NPTFPATKAQ LYSANRPAYR PPAPRRRTHS RGCCRRCCCW
TIFVIILLIL LLAAASAVVY LIYCPQRPSF TVSSLKVSSL NLTSSTHLAT AISLSVVAKN
PNKNVGFSYD AADVTVYRVS PGDDDVVIGK GSIASFVHGE KNTTLLKSTV GSPPGDLDEL
SASKLKGDLK AKRGVAVKIV LDTKVKVKMG AVKTPKSGIR VTCEGIRAVA PTGKKATTAV
TTAAKCKVDL RFKVWKFTF
//