ID A0A0D3E4J4_BRAOL Unreviewed; 1052 AA.
AC A0A0D3E4J4;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
GN Name=106317952 {ECO:0000313|EnsemblPlants:Bo9g035360.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo9g035360.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo9g035360.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo9g035360.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013611226.1; XM_013755772.1.
DR AlphaFoldDB; A0A0D3E4J4; -.
DR STRING; 109376.A0A0D3E4J4; -.
DR EnsemblPlants; Bo9g035360.1; Bo9g035360.1; Bo9g035360.
DR GeneID; 106317952; -.
DR Gramene; Bo9g035360.1; Bo9g035360.1; Bo9g035360.
DR KEGG; boe:106317952; -.
DR eggNOG; ENOG502QQ7T; Eukaryota.
DR HOGENOM; CLU_001561_0_1_1; -.
DR OMA; DSQIFIL; -.
DR OrthoDB; 657370at2759; -.
DR Proteomes; UP000032141; Chromosome C9.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR PANTHER; PTHR11017:SF348; ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE; 1.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 19..184
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 1052 AA; 119314 MW; 46AF9703489FBAE9 CRC64;
MSSLMSSSSS SSSSRPRTWR YSVFSSFHGP DVRKTFLSHL RKQFNTNGIS MFDDQGIERG
QTIAPELIRA IRESRISIVV LSKNYASSSW CLDELVEIFK CKEDNNQIVM TVFYGGVDPS
DVRKQTGDFG KVFKKTCTRK TEEERRKWSQ ALTDAGDIAG EHFLNWDNES ETIEKIARDV
SNKLNATIVS NDFEDMVGIE AHLEKMQSLL LLDDEDGVML VVICGPAGIG KTTIARALYS
RLSSTFQLSC FMENLRESCN SGGLDEYGWK LRLQELLLSK ILNQNGIKIN HLGMMPQRLC
DQKVFIILDD VDDLQQLEAL ANDTNWFGHG SRIIVTTENQ ELLEQHGINN TYHVDFPPKE
NARKILCRYA FKQSWAPYGF ENLAERATEL CSNLPLGLRV MGSMLRGKKE DDWESMLQRL
EKSSISKIDA LLRVGFDSLH ESDQTIFLLI AVFFNYEDDG HVKTMLADSG LDVRLGLKTL
AYKSLIHLST KGEIVMHKLL KQVGIQAIQR QEPRKRQILI DTDNILDALE NDFGNRSLMG
ISFDISTIKD SMDISPRALK RMRNLRFLWI YNSRWDTNVR VHVPEDMDFP PRLKLLHWEE
YPGKCLPHTL RPENLVKLYL EESKLKHLWK GTQPLGNLKK LNLNSSYNLE ELPDLGNATN
LEILDVCKCQ SLVEIHSSVG NLHKLEKLKM NYCGKLQVVP SLFNLASLQS VSIAGCYQLR
KFPDISATIT ELKIIDTMLE ELTASIRLGS RLEDLYIVGS VIPNEYFLTH PHVARLMLEK
SGADIERLPD CIKDLHCLED LFIIGCPKLV SLPELPRSLT RLVVWNCESL ETLVPFPSDS
QIFILFFPNC FKLGPEARRV IIQQRSCHQF LPGRDIPAEF THRAIGKSLT ITSNACGGFR
MCVIFSPKSE MGVAIDIDLM CRISINGCPK ENCIVSLVGG VRSEHLAIFY SEILREYDEV
EQYSEILFEF SSSSQDIEIV ECGVQILVEE TNSEQLLDND NGSLADESFE LDASRVKIID
DLHGSLEFDA SRVDTDDDLL GLFAPTFFSF GF
//
