ID A0A0D3EPS3_9ORYZ Unreviewed; 955 AA.
AC A0A0D3EPS3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=Pre-mRNA-processing protein 40A {ECO:0008006|Google:ProtNLM};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART01G18470.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART01G18470.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G18470.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART01G18470.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3EPS3; -.
DR STRING; 65489.A0A0D3EPS3; -.
DR PaxDb; 65489-OBART01G18470-1; -.
DR EnsemblPlants; OBART01G18470.1; OBART01G18470.1; OBART01G18470.
DR Gramene; OBART01G18470.1; OBART01G18470.1; OBART01G18470.
DR eggNOG; KOG0152; Eukaryota.
DR HOGENOM; CLU_005825_2_0_1; -.
DR Proteomes; UP000026960; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 5.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR039726; Prp40-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR11864; PRE-MRNA-PROCESSING PROTEIN PRP40; 1.
DR PANTHER; PTHR11864:SF0; PRP40 PRE-MRNA PROCESSING FACTOR 40 HOMOLOG A (YEAST); 1.
DR Pfam; PF01846; FF; 5.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 5.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 5.
DR PROSITE; PS01159; WW_DOMAIN_1; 1.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 147..180
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 188..221
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 389..443
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 456..511
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 524..578
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 597..659
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 731..786
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 75..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..319
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 337..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 794..955
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 430..460
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 569..615
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 650..677
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 80..122
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 128..155
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 238..276
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..319
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 337..351
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 794..868
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 877..901
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 910..927
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 955 AA; 109768 MW; 0628CB4F3035ADD1 CRC64;
MTLTHTYPAP SHGPRQERGQ SRPPMMGSSV PPQNLGPPMP MQFRPVIHQQ QPPQFMQPGQ
QFRPVGQAMP GANIGMPGQM PHFQQPTQHL PHSGQVPPAS QAYQPSSVPP PIVQSWGTAP
GQNVPLVQPG HQPMSSSATM PSINSSETSS SDWQEHTSAD GKKYYYNKKT RQSSWEKPAE
LMTPLERADA STEWKEFTTQ EGRKYYYNKV TKQSKWTIPD ELKIARELAE KASNPRPDQE
TETTAGAPSG PTSNSVEPSS VPANQSSTTI MGAPSTLDAA ANSVPPGAGP SHNMENTSSS
SNTAMQNGGP STVVTPVIST EIPSVASDAG ISRANNEYPS LASTADTQNG ASAEELEEAK
KTMAVPGKIN VTPVEDKTSE EEPVTYANKL EAKNAFKALL ESSNVESDWT WDQAMRVIIN
DKRYGALKTL GERKQAFNEY LNQRKKLEAE ERRIKQRKAR DDFLAMLEES KELTSSTRWS
KAITMFEDDE RFSAVERPRE REDLFESYLM ELQKKERARA AEEHKRHIAE YRAFLESCEF
IKTSTQWRKV QERLEDDERC SRLEKIDRLE IFQEYIRDLE KEEEEHKRIH KEQVRRQERK
NRDEFRKMLE EHVAEGMLTA KTRWRDYCAQ VKDSSVYLAV ASNISGSMPK DLFEDVMEEL
EKQYQDDKAR IKEAVKSGKI PMTTSWTLED FETAVTEDDT LKGITNINMK LIFDDQVERL
REKEVKEAKK RQRLGENFSD LLYSIKEISA SSTWDDSKAL FEDSQEYKAL DSETYSRELF
EECVVHLKER LKEKERLREE EKARKEKERE EKERRKEKEK KEKERKEKER DKEKEREKDK
GKDRSRKDEM DIDAVDADSH GSKDKKREKD KEKKHKRRHH DTADDVSSER DEKDDSKKSR
RHSSDRKKSR KHTHASDSDS ENRHKRHKKD RDSSRRNGTR DDLEDGELGE DGEIH
//