ID A0A0D3F978_9ORYZ Unreviewed; 1684 AA.
AC A0A0D3F978;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=RBR-type E3 ubiquitin transferase {ECO:0000313|EnsemblPlants:OBART02G28760.2};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART02G28760.2};
RN [1] {ECO:0000313|EnsemblPlants:OBART02G28760.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART02G28760.2};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART02G28760.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- FUNCTION: Might act as an E3 ubiquitin-protein ligase, or as part of E3
CC complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating
CC enzymes and then transfers it to substrates.
CC {ECO:0000256|ARBA:ARBA00003976}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: Belongs to the RBR family. Ariadne subfamily.
CC {ECO:0000256|ARBA:ARBA00005884}.
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DR EnsemblPlants; OBART02G28760.2; OBART02G28760.2; OBART02G28760.
DR Gramene; OBART02G28760.2; OBART02G28760.2; OBART02G28760.
DR Proteomes; UP000026960; Chromosome 2.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:InterPro.
DR CDD; cd20341; BRcat_RBR_RNF14; 1.
DR Gene3D; 1.20.120.1750; -; 4.
DR Gene3D; 3.10.110.10; Ubiquitin Conjugating Enzyme; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 3.
DR InterPro; IPR031127; E3_UB_ligase_RBR.
DR InterPro; IPR002867; IBR_dom.
DR InterPro; IPR006575; RWD_dom.
DR InterPro; IPR044066; TRIAD_supradom.
DR InterPro; IPR016135; UBQ-conjugating_enzyme/RWD.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR11685; RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR11685:SF257; RBR-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR Pfam; PF01485; IBR; 3.
DR Pfam; PF05773; RWD; 3.
DR SMART; SM00647; IBR; 5.
DR SMART; SM00184; RING; 5.
DR SMART; SM00591; RWD; 3.
DR SUPFAM; SSF57850; RING/U-box; 9.
DR SUPFAM; SSF54495; UBC-like; 3.
DR PROSITE; PS50908; RWD; 3.
DR PROSITE; PS51873; TRIAD; 3.
DR PROSITE; PS00518; ZF_RING_1; 2.
DR PROSITE; PS50089; ZF_RING_2; 2.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Ubl conjugation pathway {ECO:0000256|ARBA:ARBA00022786};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 85..224
FT /note="RWD"
FT /evidence="ECO:0000259|PROSITE:PS50908"
FT DOMAIN 275..499
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 279..324
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 673..812
FT /note="RWD"
FT /evidence="ECO:0000259|PROSITE:PS50908"
FT DOMAIN 833..1037
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 1187..1328
FT /note="RWD"
FT /evidence="ECO:0000259|PROSITE:PS50908"
FT DOMAIN 1379..1601
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS51873"
FT DOMAIN 1383..1428
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 502..521
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 610..630
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 505..521
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1684 AA; 189548 MW; 6258814BEE1AD5E7 CRC64;
MMAAGGSSSN PMSSEASSSA VAAAAGVAVR DVGDDKPLPS AEVDITYWAA QEEAAALLES
MAARARGEDD LPEEQLQANN QLQEDEVIAL QAIFGDDMVI LENKDNLRFI QIFVHYTLPD
SIRVFLNLRR SGAMVGTDDS ENHNGGELYH ACRLQHLPPV VLTCLLPRSY PSICAPYFTI
SAKWLDEPKV SYLCAALDEV WTELPGQEVI YRWVDWLNSS SWSSIALNDE IVLDPDKTLK
IGDERAIARR ILVESTIPLM QSYSEKRSHK IFLESLLVCG ICLSEDVGRN FIKLPCHHSF
CLKCMEFHCK IHVKEGNLTQ LACPDTNCRN PLPPSVLKSL LRDDGYAQWE SFALQKLLDA
MPDLVYCPRC SAACLEVDND AQCPGCFFTF CTLCKRRRHV GDTCITPEEK IRILKERQKL
YSIPEEQLLK EQREIDELIN IQEALRDSKQ CPRCKMAISK IEGCNKMTCG NCGRFFCYRC
NKAIGGYDHF WNGNCDMFER EQDENPQQQD DENFDGDPDE DAELLEPEWV LLTYPCPNCG
RRNEKLGTNN HILCIGCRGH YFPSDYDFMD TSEDEGQVSS GSPSPISLNI KASEQSIPWE
IPMSSEASSS SSAAVAVRDL GDDNPSASPE VDTTYWAAQE EATALLESMA ARVRGEEELS
EEQMQANDQL QEDEVIALEA IFGGDMVILE NKDSLRFIQI FVHYSLPDGI RVFLNLRRSG
ALVGTVDNEN HNGGEVCYAC RLQHLPPVVL TCLLPRSYPS TFAPYFTISA KWLDEPKVSY
LCAAFDEIWT ELPGQEVIYR WVDWLNSSSW SFIALNDEIV LSPDRTSKFG DERAIARRIL
VESTIPLMQI YSEKRSHKCM ESHCKIHVKE RNLTQLTCPD TNCRSPLPPS LLKNLLRDDG
YAQWESFALK KLLDAMPDLV YCPRVALSLQ SFCYTQLCYF FHKKKDENDI YLMERQKLHS
MPAEQLLKER RELEELMNIQ EALRSSKQCP HCKMAISKIE GCNKMICVNC GGYFCYRCNL
AIKGYEHFWG GNCVLFGTHA HYQIRNPQQQ RDENPGDHAE LLEQRVQLTY PCPNCGSRNE
KLGTNNHISY PGCRGHYCAL CRKRVLKCSQ HFGPRDEGQV SSGSLVAAVE ITMMTPGSSS
TSVPGDEADA GNWDAGVETA ARLEAMVHAE DELSEEQIQA NNQTQEDELL ALQAIYCDDL
VIFDNKDGLR FFQISLHYQL AGDIRVYLNV CPNGRTETGA ENDDDDDSDR LLYACSLQHL
PPVVLTCLLP RLYPSHRAPY FVVAAKWLDE PEVSSFCSVL DEIWAEQPAG QEVVYKWVDW
LSTSSWSCIA SDDQIVFGPD ADSAGGDDRA IGRSCSLDSM IPLIQRYSKE RSHEIFARRI
HECGVCLSEN TGRNFIQLPC SHSFCVKCME TQCRIHVKEG SVARLTCPDT SCRRPLPLAL
LRGLLGDGEY ARWESLVLRG CWTRCPTCSA ACVAAGDDAQ CSRCFFTFCA VCRERLHVGD
TCVSPNQMLD IMLERQKEKR PLAAPSPDSQ AVSEKRKMEE LLSLREVMRT SRQCPSCKMA
VSKTAGCNKM VCSNCGRPFC YRCSRAITGY EHFAGECKLF ESVGKGWFPG QAMWMNLEYD
YDEIAEIGTP SWIRAIRYPC PTCGAKRTKS GNNDLLTCRG CRTHYCALCS KKVWSIAEHY
GPAE
//
