ID A0A0D3FL46_9ORYZ Unreviewed; 391 AA.
AC A0A0D3FL46;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART03G25510.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART03G25510.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART03G25510.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART03G25510.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR AlphaFoldDB; A0A0D3FL46; -.
DR STRING; 65489.A0A0D3FL46; -.
DR PaxDb; 65489-OBART03G25500-1; -.
DR EnsemblPlants; OBART03G25500.1; OBART03G25500.1; OBART03G25500.
DR EnsemblPlants; OBART03G25510.1; OBART03G25510.1; OBART03G25510.
DR Gramene; OBART03G25500.1; OBART03G25500.1; OBART03G25500.
DR Gramene; OBART03G25510.1; OBART03G25510.1; OBART03G25510.
DR eggNOG; KOG2258; Eukaryota.
DR HOGENOM; CLU_030226_4_1_1; -.
DR Proteomes; UP000026960; Chromosome 3.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08602; GDPD_ScGlpQ1_like; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..391
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5010766236"
FT DOMAIN 44..362
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 391 AA; 45419 MW; 272445F87CB106C1 CRC64;
MAAFWLISII VLVLLSGESN ANPAASQQGQ LDVNHRKPLQ TFRPYNIAHR GSNGEIPEET
TAAYLRAIEE GADFIESDIL ATKDGHLICF HDVILDATTD IANRTEFANR KRTYEVERQN
VTGWFVVDFT LEELKSLRVK QRYNFRDQQY NGKYQIITFD EYILIALYAD RVVGIYPELK
NPIFINEHVK WSDGKKFEDK FVQTLLKYGY KGEYMSEDWL KQPLFIQSFA PSSLIYMSNM
TNSPKIFLID DTTVRTQDTN QSYYEITSDA YLAFIRKYIV GIGPWKDTIV PPINNYLGPP
TDLVARAHAL NLQVHPYTFR NENMFLHFDF HQDPYLEYEY WLGEIGVDGL FTDFTGTLHR
FQECTTPYPK NEKNAEALLQ KINYMLKDSG Y
//
