ID A0A0D3G0V8_9ORYZ Unreviewed; 1655 AA.
AC A0A0D3G0V8;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Clu domain-containing protein {ECO:0000259|PROSITE:PS51823};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART04G27270.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART04G27270.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART04G27270.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART04G27270.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR STRING; 65489.A0A0D3G0V8; -.
DR PaxDb; 65489-OBART04G27270-1; -.
DR EnsemblPlants; OBART04G27270.1; OBART04G27270.1; OBART04G27270.
DR Gramene; OBART04G27270.1; OBART04G27270.1; OBART04G27270.
DR eggNOG; KOG1839; Eukaryota.
DR HOGENOM; CLU_001902_1_1_1; -.
DR Proteomes; UP000026960; Chromosome 4.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0043229; C:intracellular organelle; IEA:UniProt.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0019750; P:chloroplast localization; IEA:EnsemblPlants.
DR GO; GO:0006996; P:organelle organization; IEA:InterPro.
DR CDD; cd15466; CLU-central; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR033646; CLU-central.
DR InterPro; IPR025697; CLU_dom.
DR InterPro; IPR028275; CLU_N.
DR InterPro; IPR027523; CLU_prot.
DR InterPro; IPR023231; GSKIP_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR12601; EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3; 1.
DR PANTHER; PTHR12601:SF45; PROTEIN REDUCED CHLOROPLAST COVERAGE 3; 1.
DR Pfam; PF15044; CLU_N; 1.
DR Pfam; PF12807; eIF3_p135; 1.
DR Pfam; PF13424; TPR_12; 2.
DR SMART; SM00028; TPR; 3.
DR SUPFAM; SSF103107; Hypothetical protein c14orf129, hspc210; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51823; CLU; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT DOMAIN 316..604
FT /note="Clu"
FT /evidence="ECO:0000259|PROSITE:PS51823"
FT REPEAT 868..901
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT REGION 1..28
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 134..172
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1078..1146
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1301..1385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1479..1544
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1569..1633
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1082..1137
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1319..1374
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1482..1508
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1583..1599
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1600..1629
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1655 AA; 182176 MW; FBDD0EE12B3F89EA CRC64;
MAPKGAGRGK GRGGGGGGKG DKRKKEEKVV PSAIDVTVVT PYESQVTLKG ISTDRVLDVR
KLLGSNVETC HLTNYSLSHV TRGQRLEDGV EIVSLKPCSL TIVEEEYATE AAAAAQVRRL
LDIVACTTAF ANKPRDGAKH KSSKHARPAT PPSPPALAAS PDAHGAGAAQ APPISEAHDM
AAIRPPPRLG EFYDFLSFAH LTPPVHFIRR KESNGASQEG DYFEIEVKVC NGKLLHIVAS
VKGFYSAGKP HTVSHSLVDL LQQLSSAFAN AYDALMKAFL DHNKFGNLPY GFRANTWLIP
PIYLDSATKC PALPVEDENW GGNGGGNGRD GKYDRRRWAK EFSTLARMPC KTEEGRVIRD
RKAFLLHNLF VDTAIFRAAS TIQRLIDLSG NSTSQQAGPD GSLAIEERVG DLLITVKRDQ
ADASLKLEDK VDGVALYQTG SMDISQRNLL KGLTSDESVV VKDTSTLGVV IVKHCGYTAT
VKVSGRTKDG NGGKQTSDIC DHLDGISNVD VDDLPDGGSN ALNINSLRIS LPKIVNSDIA
SSQCPTPQSH VDNHARKLVR KILEDSLMKL ENMPANNPRT IRWELGSSWL QNLQKKDSPA
SEDKKNAGHV EKETTIKGLG KHFEQLKKIK KKECHVEGAM SEKEDSDSNC SVINGMEESE
NTKETDISKL MSEDDFCRLK DLGAGLHQKS LEELTMMAHK FYDDTALPKL VADFASLELS
PVDGRTMTDF MHTRGLNMCS LGRVVELAEK LPHIQSICIH EMVIRSFKHI VRAVIAAVDD
MQNMSAAISE TLNILLGCPR LESDTETDAH SEHNLRFRWV ERFLSKRYNW KLKDEFAHLR
KFIILRGLCS KALSKIVAVC GPYHRLTANA YSLLAVVLYH TGDFNQATIY QQKALDINER
ELGLDHPETM KSYGDLSVFY YRLQHIEMAL KYVNRALYLL QFSCGLSHPN SAATYINVAM
MEEGMGNVHV ALRYLHEALK CNKRLLGADH IQTAASYHAI AIALSMMDAY SLSVQHEQTT
LQILQEKLGQ DDLRTQDAAA WLEYFESKAL EQQEAARRGI PKPDSSIASK GHLSVSDLLD
YISPDQERKE RDTQRKGRRA KNNIRAHQGE LVEEKESFEH DIGSPREANK EEFQQVKSKA
HPPAISEENY AIHDELKQVD PLSPEEYSDE GWQAANLRGR SANVRKKSSR RRPALTKLMV
DRLEDGRTGS AYRAGVQQHM KGDKEDVINS SSQLSFGSFL KTDKVNGNSS NIEDKVFNAI
SKPERGIKLS GINRPATIAS KLVSYKDVAV SPPGTVLKPI LEQKEAKEKD NAQNTDLIVS
SEEEDKKLTD EDEEKEKPSH DSSKEVLSSE PEEIGNDEKA PDSNSDESPT ESKKKGGSKL
SASAPPFNPG SLLSMSHPYS TVAIYDASVV LQPIPSQPME ILPHAIDTRV PRGPRSTLYY
RTGHTFQRKQ GYAHSQSTIL RGSNSPPTMN PHAAEFVPGK TSQQPDVANR EPSADVSVTD
SADQLLAPQT SDEVKAGMPA AEQAIQGEST SPCKGKENRA KDALRNSCKT ELARQILFSF
IVKSVHDSLG STGAESDRKP SGPDESGNAQ SSNNINKSPS GRKELDKQQK ATVVPKSEKD
TEGFTVVSKR RRSKQHFVHP IHGLYSQQSI CTSVS
//
