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Database: UniProt
Entry: A0A0D3G474_9ORYZ
LinkDB: A0A0D3G474_9ORYZ
Original site: A0A0D3G474_9ORYZ 
ID   A0A0D3G474_9ORYZ        Unreviewed;      1212 AA.
AC   A0A0D3G474;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   RecName: Full=JmjC domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza barthii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART05G06220.1};
RN   [1] {ECO:0000313|EnsemblPlants:OBART05G06220.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART05G06220.1};
RX   DOI=10.1007/s12284-009-9025-z;
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De novo next generation sequencing of plant genomes.";
RL   Rice 2:35-43(2009).
RN   [2] {ECO:0000313|EnsemblPlants:OBART05G06220.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   AlphaFoldDB; A0A0D3G474; -.
DR   STRING; 65489.A0A0D3G474; -.
DR   PaxDb; 65489-OBART05G06220-1; -.
DR   EnsemblPlants; OBART05G06220.1; OBART05G06220.1; OBART05G06220.
DR   EnsemblPlants; OBART05G06220.2; OBART05G06220.2; OBART05G06220.
DR   Gramene; OBART05G06220.1; OBART05G06220.1; OBART05G06220.
DR   Gramene; OBART05G06220.2; OBART05G06220.2; OBART05G06220.
DR   eggNOG; KOG1246; Eukaryota.
DR   HOGENOM; CLU_000991_8_0_1; -.
DR   Proteomes; UP000026960; Chromosome 5.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0008198; F:ferrous iron binding; IEA:EnsemblPlants.
DR   GO; GO:0032453; F:histone H3K4 demethylase activity; IEA:EnsemblPlants.
DR   GO; GO:0045814; P:negative regulation of gene expression, epigenetic; IEA:EnsemblPlants.
DR   GO; GO:0040010; P:positive regulation of growth rate; IEA:EnsemblPlants.
DR   Gene3D; 3.30.160.360; -; 1.
DR   Gene3D; 2.60.120.650; Cupin; 1.
DR   InterPro; IPR003889; FYrich_C.
DR   InterPro; IPR003888; FYrich_N.
DR   InterPro; IPR003347; JmjC_dom.
DR   InterPro; IPR003349; JmjN.
DR   InterPro; IPR004198; Znf_C5HC2.
DR   PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR   PANTHER; PTHR10694:SF113; PROTEIN JUMONJI; 1.
DR   Pfam; PF05965; FYRC; 1.
DR   Pfam; PF05964; FYRN; 1.
DR   Pfam; PF02373; JmjC; 1.
DR   Pfam; PF02375; JmjN; 1.
DR   Pfam; PF02928; zf-C5HC2; 1.
DR   SMART; SM00542; FYRC; 1.
DR   SMART; SM00541; FYRN; 1.
DR   SMART; SM00558; JmjC; 1.
DR   SMART; SM00545; JmjN; 1.
DR   SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR   PROSITE; PS51543; FYRC; 1.
DR   PROSITE; PS51542; FYRN; 1.
DR   PROSITE; PS51184; JMJC; 1.
DR   PROSITE; PS51183; JMJN; 1.
PE   4: Predicted;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT   DOMAIN          128..169
FT                   /note="JmjN"
FT                   /evidence="ECO:0000259|PROSITE:PS51183"
FT   DOMAIN          322..488
FT                   /note="JmjC"
FT                   /evidence="ECO:0000259|PROSITE:PS51184"
FT   DOMAIN          993..1051
FT                   /note="FYR N-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51542"
FT   DOMAIN          1053..1143
FT                   /note="FYR C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51543"
FT   REGION          56..79
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          189..240
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          675..699
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          751..772
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          808..837
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          876..952
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        219..233
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        676..697
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        876..915
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        933..952
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1212 AA;  134414 MW;  A6F085393513B133 CRC64;
     MMGVTTTLNE DTEPSIPPGF GPFATLPLWG IHNDAKPAVT HSTPVQALQS IRKDSEECQP
     SAAVSRSDTP CSTSGTQTCR KSLRNRPPID YSRFEHISDE DSDVEIVEKD VIAKWNPAGA
     RRPALDEAPV FYPTEEEFED TLKYIESIRP MAEPYGICRI VPPSSWKPPC LLKDKSIWEG
     SKFSTRVQKV DKLQNRKSSK KGRRGGMMKR RKLAESEENS ATAHTQTGMQ QSPERFGFEP
     GPEFTLQTFQ KYADDFSKQY FRKDTSMDSV PSVEDIEGEY WRIVEVPTEE IEVIYGADLE
     TGTFGSGFPK LSPETKSDAE DKYAQSGWNL NNLPRLQGSV LSFEGGDISG VLVPWVYVGM
     CFSSFCWHVE DHHLYSLNYM HWGAPKMWYG VPGKDAVNLE SAMRKHLPEL FEEQPDLLHN
     LVTQFSPSLL KSEGVHVYRC VQHEGEFVLT FPRAYHAGFN CGFNCAEAVN VAPIDWLPIG
     HNAVELYREQ ARKITISHDK LLLGAAREAI RAQWDILFLK RNTADNMRWK SICGADSTIF
     KALKARIETE LAQRKTLGVP AQSRKMDAEF DSIDRECALC YYDLHLSASG CPCCPEKYAC
     LVHAKQLCSC DWDKRFFLFR YDVNELNILA DALGGKLSAI HRWGVSDLGL SLSSCVKREK
     VQDSKTVRRL TDGPRRSYMS QASAVSLVSS STSNEQKDEG NKIMKIASPQ TNNVCPSVEQ
     RKSENISPLK EPCVRNELSC TTNSDSNGLQ YNGGLGGHKG SAPGLPVSSS PSFSSNVATR
     PISTSSVSMK IVQGLVASKS CIQASSRTGD SRSLLGEHHN RSPAMIHDGT NMKSSLESSN
     NSCRLIASDY NATPCHSSKD QVLVTPGTNA SVATLKDSSQ VHSASSQQFV RTGPWTQSAS
     HEASSPSTSA LNPSLDPPAM KNLYGGFTQG SAHPGPPSFS NQQPNDGRLQ RTSESLPGVE
     ARARGHPTVT AQPALEIHSR NGGAQKGPRI ANVVHRFKCS VEPLEIGVVL SGRLWSSSQA
     IFPKGFRSRV KYFSIVDPIQ MAYYISEILD AGMQGPLFMV KLENCPGEVF INLSPTKCWN
     MVRERLNMEI RRQLNMGKSN LPTLQPPGSV DGLEMFGLLS PPIVQAIWAR DRDHICTEYW
     RSRPHVLIED PNNRHMLSQG PPLLALRGLI QRANRDELQV LRSLMTNSNN LDDSSRQQAA
     HIIEEEIAKQ LC
//
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