ID   A0A0D3GXW8_9ORYZ        Unreviewed;      2734 AA.
AC   A0A0D3GXW8;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza barthii.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART08G07390.1};
RN   [1] {ECO:0000313|EnsemblPlants:OBART08G07390.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART08G07390.1};
RX   DOI=10.1007/s12284-009-9025-z;
RA   Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA   Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA   Knight J., Niazi F., Egholm M., Wing R.A.;
RT   "De novo next generation sequencing of plant genomes.";
RL   Rice 2:35-43(2009).
RN   [2] {ECO:0000313|EnsemblPlants:OBART08G07390.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   STRING; 65489.A0A0D3GXW8; -.
DR   PaxDb; 65489-OBART08G07390-1; -.
DR   EnsemblPlants; OBART08G07390.1; OBART08G07390.1; OBART08G07390.
DR   Gramene; OBART08G07390.1; OBART08G07390.1; OBART08G07390.
DR   eggNOG; KOG0390; Eukaryota.
DR   eggNOG; KOG2398; Eukaryota.
DR   HOGENOM; CLU_227144_0_0_1; -.
DR   Proteomes; UP000026960; Chromosome 8.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR   GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR   CDD; cd09257; AP_muniscins_like_MHD; 1.
DR   CDD; cd18793; SF2_C_SNF; 2.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 2.
DR   InterPro; IPR044567; CLSY/DRD1.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR028565; MHD.
DR   InterPro; IPR018808; Muniscin_C.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR038718; SNF2-like_sf.
DR   InterPro; IPR049730; SNF2/RAD54-like_C.
DR   InterPro; IPR000330; SNF2_N.
DR   PANTHER; PTHR45821:SF1; ATP-DEPENDENT HELICASE FAMILY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR   Pfam; PF00271; Helicase_C; 2.
DR   Pfam; PF10291; muHD; 1.
DR   Pfam; PF00176; SNF2-rel_dom; 2.
DR   SMART; SM00487; DEXDc; 2.
DR   SMART; SM00490; HELICc; 2.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 4.
DR   PROSITE; PS51194; HELICASE_CTER; 2.
DR   PROSITE; PS51072; MHD; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT   DOMAIN          637..802
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   DOMAIN          1421..1659
FT                   /note="MHD"
FT                   /evidence="ECO:0000259|PROSITE:PS51072"
FT   DOMAIN          2269..2434
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
SQ   SEQUENCE   2734 AA;  303435 MW;  FC1D06C163F3DBD7 CRC64;
     MSTSFILTGC NPSPSIKSCP GPLPLPSLCS AVLFALLYYF GKGRKEMHRL KNWLQQDTVA
     LIIGGGSDSS GIVGRKRRRC DLIRERWCCL CPVWCKEAQE VVVPGRGRNG ARQRDWGGCA
     LGICGWGYST TEVLGGICNS SVEKAEERET VIPAISNMEK MGEKQQKSIP RDRKRKGELD
     PAADYVKDLW DAFYVTAEST HLDTSEVNNK KQLDNCNHDI HVYEDLGHVC HECGLVVRKA
     DSLFHYQWKK ASRKRTNVNE VCLKKVGSDA ISLSEDFIFS DIAIHPRHAK NIRPHQLEGF
     KFLVNNLVTD EPGGCILVHA PGSGEIFMLI SFIQGFMARH FTARPLVVLP EGILGTWKRE
     FQQWQVEDIP LYDFDSIKAD NRVEQLEVLK SWSSKRSILF VGSKHFTQIV CDDRDENAVA
     ECRDTLLMVP SLLILDEGHT PSIDETDMLQ SARKVQTPCK VVMSGTLFHN HVKEVFNTLD
     LVHPGFLKTE TSWPIVTRMM GQLEISSARS ITEISESVED TLLNDDNFTR KVNVIRSLGE
     LTKDVLHYCN GEDLNEFPVL LDFSVFLELS PKQKDILCKL EEDHGMLKTS AVGAALYVHP
     CLSEISEAND VDRDDRVDSL VNSINLGDGV KARFFLNILA LANSAGEKLV AFSQYTLPMK
     FLERLLVKEM GWHVGKEIFV INGDTSMEDG QLAMDQFNGS ADAKVLFGSI KAFGEGISLV
     GASRIVILDV HLNPSVTRQA IGSTFRPGQK KKVFVYRLVA ADSPEEKAHE TAFNKEVIPK
     LWFQWSGRCT TEDFKLNQVC IDGSRDVLLE TDVIRQDIKA LYQSIDMGLV SEATVCFNNV
     SSSGLSVHDT GGNVIGQGDQ DSEKNREILW FLIGIREVPF SSVKFGISSW MGKITLIRIF
     RILYDGKGQI ALLASKGSIK DKQEACKSWR GIQAATPPHL LAVAGPLPLP SLCSAVPFAL
     LYYFGKGRKV VHTLKNWLQQ DLVGERCDAK DGGGVLQDSA RTGNPSRLRG GEVSVENKIC
     RWGYNTTEVL GRICNCSVEK AEERETIILA SGNTEKMEEK HQKSDQDFHF SDSTMAIPRE
     RKQKGEVDPA PDCLKDLWGA FYVAVESTQL DTSEVNNKKQ LNNCNHDIHV YEDLGHVCHE
     CGSFHCKALM TWKREFQQWQ VHRKYPEVYL ALDLVLHGVG SVRLSQILAT IHGDNLARMV
     NSSPDAEAKA RGADPWPAVE HLAHDRHAAR DGFTGASFEL PQETLAAGDE FSASNIAPAA
     AAATGDEPPP EEAAPVEKDP FAASELVNNS EEALVGGFKK NKETAIVVAD PAAALAGLEV
     TTLPPAEATK PTFIGVEGFE GDYGGIEFGN EEASLAEAFE GFNAPFGGGL DASEFVTTTK
     KDHKDKSITG LELLATSAGQ GPNAPGGTPL ENLLVTKSTE MTAPELYIVE EINAEFKESI
     LARVGLKGTI FLRTLPPKKA AGKETEFSFR LEGTSGMKKA ALQSTVLSNL ENGMFHVRTP
     SKEEPIPIMK YSFLPKHSPL PLRMRLVKRH SGTLLSVMIQ YASNPMLPQP LSNVTFIVKL
     PVDPTLLNVS PKAVLNRAER ELRWHIPDIP LKGPAGRLRA RMPVDQDSKD GELEVVGMVK
     FAYQGPFTLS GIKLCPATDG TAQFNEAGHT FSSGSCNPSP SIKSCPGPLP LPSLCSAVLF
     ALLYYFGKGR KEMHRLKNWL QQDTVALIIG GGSDSSGIVG RKRRRCDLIR ERWCCLCPVW
     CKEAQEVVVP GRGRNGARQR DWGGCALGTT EVLGGICNSS VEKAEERETV IPAISNMEKM
     GEKQQKSIPR DRKRKGELDP AADYVKDLWD AFYLDTSEVN NKKQLDNCNH DIHVYEDLGH
     VCHECGLVVR KADSLFHYQW KKASRKRTNV NEVCLKKVGS DAISLSEDFI FSDIAIHPRH
     AKNIRPHQLE GFKFLVNNLV TDEPGGCILV HAPGSGEIFM LISFIQGFMA RHFTARPLVV
     LPEGILGTWK REFQQWQVED IPLYDFDSIK ADNRVEQLEV LKSWSSKRSI LFVGSKHFTQ
     IVCDDRDENA VAECRDTLLM VPSLLILDEG HTPSIDETDM LQSARKVQTP CKVVMSGTLF
     HNHVKEVFNT LDLVHPGFLK TETSWPIVTR MMGQLEISSA RSITEISESV EDTLLNDDNF
     TRKVNVIRSL GELTKDVLHY CNGEDLNEFP VLLDFSVFLE LSPKQKDILC KLEEDHGMLK
     TSAVGAALYV HPCLSEISEA NDVDRDDRVD SLVNSINLGD GVKARFFLNI LALANSAGEK
     LVAFSQYTLP MKFLERLLVK EMGWHVGKEI FVINGDTSME DGQLAMDQFN GSADAKVLFG
     SIKAFGEGIS LVGASRIVIL DVHLNPSVTR QAIGSTFRPG QKKKVFVYRL VAADSPEEKA
     HETAFNKEVI PKLWFQWSGR CTTEDFKLNQ VCIDGSRDVL LETDVIRQDI KALYQSIDMG
     LVSEATVCFN NVSSSGLSVH DTGGNVIGQG DQDSEKNRYL SIASETMLVH FVHVFSFVCV
     PGQIALLASK GSIKDKQEAC KSWRDLVGER CDAKDGGGVL QDSARTGNPS RLRGGEVSVE
     NKICRWGYNT TEVLGRICNC SVEKAEERET IILASGNTEK MEEKHQKSDQ DFHFSDSTMA
     IPRERKQKGE VDPAPDCLKD LWGAFYVAVE STQLDTSEVN NKKQLNNCNH DIHVYEDLGH
     VCHECGSFHC KALMTWKREF QQWQVEHCSG FIYL
//