ID A0A0D3HC96_9ORYZ Unreviewed; 364 AA.
AC A0A0D3HC96;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 24-JAN-2024, entry version 32.
DE RecName: Full=Chromo domain-containing protein {ECO:0000259|PROSITE:PS50013};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART10G05800.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART10G05800.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART10G05800.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART10G05800.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3HC96; -.
DR STRING; 65489.A0A0D3HC96; -.
DR PaxDb; 65489-OBART10G05800-1; -.
DR EnsemblPlants; OBART10G05800.1; OBART10G05800.1; OBART10G05800.
DR Gramene; OBART10G05800.1; OBART10G05800.1; OBART10G05800.
DR eggNOG; KOG1911; Eukaryota.
DR Proteomes; UP000026960; Chromosome 10.
DR GO; GO:0000792; C:heterochromatin; IEA:UniProt.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0031507; P:heterochromatin formation; IEA:InterPro.
DR CDD; cd00024; CD_CSD; 1.
DR CDD; cd18982; CSD; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR008251; Chromo_shadow_dom.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR044251; LHP1-like.
DR PANTHER; PTHR47240; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR PANTHER; PTHR47240:SF2; CHROMO DOMAIN-CONTAINING PROTEIN LHP1; 1.
DR Pfam; PF00385; Chromo; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SMART; SM00300; ChSh; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026960}.
FT DOMAIN 49..108
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 99..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 215..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..141
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..242
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 364 AA; 39810 MW; 770C60780C1D0EBC CRC64;
MARRGGSGGG EESEQAAAEE EDSPLVVVEA EAAAPVVDGS PPKLAEGYYE IEDIRRRRLR
KGKLQYLVKW RGWPESANTW EPLENLSACS DIIDAFEMRL QSPRPGRKRK RKITTTPVAG
SNPSHGKRGR PRLDAKSHTR APAPEPKQLP CRTSSRRATN CSSKTVAGLD ASGSVVRNQL
AQNIVQEGSS SVISRTPCQE LPLSIRLTDQ QNEHHLVNGS SNSENLVKVP PSQGSQVTGA
KKRKSGNVRR FEQNKPTQGQ GECGALVVAE DVGSTEGETG DKKKTEGCPN RVHITKIIKP
VRFAAAVNND VQQVSITFKA LRSDGQEVMV DDKELKANNP LLLISYYEQC LRYNPTSPYP
SHNS
//
