ID A0A0D3HLU6_9ORYZ Unreviewed; 770 AA.
AC A0A0D3HLU6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART11G13500.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART11G13500.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART11G13500.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART11G13500.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D3HLU6; -.
DR STRING; 65489.A0A0D3HLU6; -.
DR PaxDb; 65489-OBART11G13500-1; -.
DR EnsemblPlants; OBART11G13500.1; OBART11G13500.1; OBART11G13500.
DR Gramene; OBART11G13500.1; OBART11G13500.1; OBART11G13500.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_1_1; -.
DR Proteomes; UP000026960; Chromosome 11.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR24015:SF739; OS03G0644200 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 143..177
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 244..279
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 315..349
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 458..492
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 493..527
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 673..766
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 770 AA; 85336 MW; 70851D968D7D4CA8 CRC64;
MASTPSLAVS AAAAIFPSAA DPRRPPPPSV AIVDKNSSYG RSLQAADNGG GGGMEAPLRP
LDVQEAMTML TEGKAVQSAM YVPLLHRCVE TGSLGAARAV HGHMAKTGAG ADMFVATSLV
NAYMRCGAAR DARRLFDGMP ERNVVTWTAL VTGYTLNSQP ALGLEVFVEM LEMGRYPSHY
TLGATLNACL ASCDVDLGKQ VHGYAIKYGA ESITSMGNSL CRLYSKLGSL DSALRAFWRI
PEKNVITWTT MISACAEDEE CVELGLSLFI DMLMDGVMPN EFTLTSVMSL CGTRLDLNLG
KQVQAFSFKI GCETNLPVKN STMYLYLRKG ETDEAMRLFE QMEDASIITW NAMISGYAQI
MDSAKDDLQA RSRGFQALTI FRDLKRSVMK PDLFTFSSIL SVCSAMMALE QGEQIHAQTI
KSGFLLDVVV NSALVNMYNK CGCIQDANKA FLEMPTRTFV TWTSMISGYS QHGQPQEAIQ
LFEEMRLAGV RPNEITFVSL LSACSYAGLV EEAEHYFDMM KKEYCIEPVV DHYGCMIDMF
VRLGQVEDAF SFIKRTGFEP NEAIWSSLVA GCRSHGNMEL AFYAADKLLE LKPKGIETYI
LLLNMYISTE RWQDVARVRK LMKQEDVGIL RDRSWITIKD KVYFFRANDR THPQATELYQ
LLENLLEKAK AIGYEPYQNA ELSDSEDDEK PAAGSLKHHS ERLAVALGLL QTPPGATVRV
TKNITMCRDC HSSIKLFSLL ENREIIVRDS KRLHKFKDGR CSCGDFGALL
//
