ID A0A0D3LFH1_9BACT Unreviewed; 885 AA.
AC A0A0D3LFH1;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE SubName: Full=Gaf domain protein {ECO:0000313|EMBL:AHM60663.1};
GN ORFNames=D770_12030 {ECO:0000313|EMBL:AHM60663.1};
OS Flammeovirgaceae bacterium 311.
OC Bacteria; Bacteroidota; Cytophagia; Cytophagales; Flammeovirgaceae.
OX NCBI_TaxID=1257021 {ECO:0000313|EMBL:AHM60663.1, ECO:0000313|Proteomes:UP000064112};
RN [1] {ECO:0000313|EMBL:AHM60663.1, ECO:0000313|Proteomes:UP000064112}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=311 {ECO:0000313|EMBL:AHM60663.1,
RC ECO:0000313|Proteomes:UP000064112};
RA Fang C.;
RT "Complete bacteria genome obtained just from illumina data.";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP004371; AHM60663.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D3LFH1; -.
DR STRING; 1257021.D770_12030; -.
DR KEGG; fbt:D770_12030; -.
DR OrthoDB; 1109395at2; -.
DR Proteomes; UP000064112; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013655; PAS_fold_3.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR24422:SF27; BIOFILM DISPERSION PROTEIN BDLA; 1.
DR PANTHER; PTHR24422; CHEMOTAXIS PROTEIN METHYLTRANSFERASE; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF08447; PAS_3; 3.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00086; PAC; 3.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50113; PAC; 3.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000064112};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 33..49
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 55..73
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 78..95
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 101..118
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 163..184
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 477..533
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 532..584
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 654..706
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 742..793
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 794..848
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT REGION 861..885
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 415..463
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 687..721
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 885 AA; 101744 MW; 2BFC34576A9C201C CRC64;
MNISIAETTA IKSNGYKKFL SERYQEADRN TSYFIYGFLI LGILIASFYD TWLFAFGVGG
ACLAAYLLCK FLIPGTLLSR MVISAVFSIF MLQFIGQMHG MYEMHFFFFI NIAILIIYQD
WRIMLPYTLI AAAHHGTLFG LQMNGYDVKD YIINQDAISH TTIGFHLGLV ALMGVVCGWW
SIVLQKRTRQ DYINKYTLES QLVNMQNNIA FASQISKGNL NASYELHNED KLGKSLVEMR
SSLLEASEKE EQEKFKNVGL AEISDILRNN TTHLEDLANQ VLARIIKYMN INQGGLFILQ
KDEDGSYLEL LSSYAYNRKK YLIKKIEIGE GLLGQAALEK DTVYLTDIPQ DYISITSGLG
EARPNCVLIV PIKSNEEVVG VMEFASFQVF QPYQIKFLEK VSETIASTII SVQVNQQTKL
LLEKSQQQAE ELRAQEEEMR QNMEEMEATQ EEMQRKEIEM RGQLSAIDNT LATIEFDIKG
SVHTANDAFL KLIGYSLEEI RGKHHRMFCE KEFTESDEYV EFWKQLQQGI SFKNDYKRIT
RQGKELWLHA TYTPVFDSKG YPYKIIKLAF DITNEKQKQL DLQGQVEAIN NSSAVIEFTP
EGKILRANWI FQDLMKYSEN ELAGKHHKIF IEEAEATTAE YREHWLKLQS GESVQGEFKR
IDKEGKTIWI RGIYGPVLDM NNKVVKVVKL AQNITAEKQL LNKAQQQMDT LDQKVRENEV
MQKDLDAYLK ALDAAALMSE ADIYGNITYV NDRFCEVAKY NREEVIGKPH SILRHPDNSK
KLFKEMWATI KSGKVFKGHY PNTAKDGSTY WVDATIEPVL GEDGKPVKYI GIRFDITEQV
KREEEIASLL QQANEHLKEI QQSEEELRQN MEEMSATQEE LSRKE
//
