ID A0A0D5C5R8_9ARCH Unreviewed; 265 AA.
AC A0A0D5C5R8;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE SubName: Full=S1 RNA binding domain protein {ECO:0000313|EMBL:AJW71868.1};
GN ORFNames=NADRNF5_2199 {ECO:0000313|EMBL:AJW71868.1};
OS Nitrosopumilus adriaticus.
OC Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
OC Nitrosopumilaceae; Nitrosopumilus.
OX NCBI_TaxID=1580092 {ECO:0000313|EMBL:AJW71868.1, ECO:0000313|Proteomes:UP000032408};
RN [1] {ECO:0000313|Proteomes:UP000032408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NF5 {ECO:0000313|Proteomes:UP000032408};
RA Bayer B., Vojvoda J., Offre P., Srivastava A., Elisabeth N., Garcia J.A.L.,
RA Schleper C., Herndl G.J.;
RT "Characterization of two novel Thaumarchaeota isolated from the Northern
RT Adriatic Sea.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AJW71868.1, ECO:0000313|Proteomes:UP000032408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NF5 {ECO:0000313|EMBL:AJW71868.1,
RC ECO:0000313|Proteomes:UP000032408};
RX PubMed=26528837; DOI=10.1038/ismej.2015.200;
RA Bayer B., Vojvoda J., Offre P., Alves R.J., Elisabeth N.H., Garcia J.A.,
RA Volland J.M., Srivastava A., Schleper C., Herndl G.J.;
RT "Physiological and genomic characterization of two novel marine
RT thaumarchaeal strains indicates niche differentiation.";
RL ISME J. 10:1051-1063(2016).
CC -!- SIMILARITY: Belongs to the eIF-2-alpha family.
CC {ECO:0000256|ARBA:ARBA00007223}.
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DR EMBL; CP011070; AJW71868.1; -; Genomic_DNA.
DR RefSeq; WP_048118552.1; NZ_CP011070.1.
DR AlphaFoldDB; A0A0D5C5R8; -.
DR STRING; 1580092.NADRNF5_2199; -.
DR GeneID; 24821364; -.
DR KEGG; nin:NADRNF5_2199; -.
DR HOGENOM; CLU_033458_0_2_2; -.
DR OrthoDB; 84794at2157; -.
DR Proteomes; UP000032408; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
DR CDD; cd04452; S1_IF2_alpha; 1.
DR Gene3D; 3.30.70.1130; EIF_2_alpha; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044126; S1_IF2_alpha.
DR InterPro; IPR024055; TIF2_asu_C.
DR InterPro; IPR024054; TIF2_asu_middle_sf.
DR InterPro; IPR011488; TIF_2_asu.
DR PANTHER; PTHR10602; EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; 1.
DR PANTHER; PTHR10602:SF0; EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; 1.
DR Pfam; PF07541; EIF_2_alpha; 1.
DR Pfam; PF00575; S1; 1.
DR SMART; SM00316; S1; 1.
DR SUPFAM; SSF110993; eIF-2-alpha, C-terminal domain; 1.
DR SUPFAM; SSF116742; eIF2alpha middle domain-like; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS50126; S1; 1.
PE 3: Inferred from homology;
KW Initiation factor {ECO:0000256|ARBA:ARBA00022540};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917}.
FT DOMAIN 12..83
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 265 AA; 30127 MW; 64B26E752CDB9588 CRC64;
MSTEIQEMPE QGEIILATVT KVMDHGAYVT LDEYDDIQGF LHISEIAPGW IRSVSRFVKD
GEKKVLLVKK VNSKRGDIDL SLKQVSKDQK KQKLKEVKKF EKGKTLLQNV QDKAKLTDEE
IEKLEDSIYS KFDSVYDAFI EIARNGIESV KDLKLAKKTA TVIGEICSKI KLPSVEIRGI
MEITSIKSDG VEIIKKVLLD VLKKDPTIDI TYLGAPKYRL SITSENFKSA EKSLKPIIEE
IQNNIEKKKG SFKFTREESK KTREN
//
