ID A0A0D6TKN4_9FLAO Unreviewed; 493 AA.
AC A0A0D6TKN4;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KIX20678.1};
GN ORFNames=SY27_12325 {ECO:0000313|EMBL:KIX20678.1};
OS Flavobacterium sp. 316.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1603293 {ECO:0000313|EMBL:KIX20678.1, ECO:0000313|Proteomes:UP000032747};
RN [1] {ECO:0000313|EMBL:KIX20678.1, ECO:0000313|Proteomes:UP000032747}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=316 {ECO:0000313|EMBL:KIX20678.1,
RC ECO:0000313|Proteomes:UP000032747};
RA Karczewska-Golec J., Kochanowska-Lyzen M., Balut M., Golec P.,
RA Madanecki P., Markert S., Piotrowski A., Schweder T., Szalewska-Palasz A.;
RT "Three Bacterial Inhabitants of the Baltic Sea under Osmotic Stress: a
RT Genomic and a Proteomic Perspective.";
RL Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KIX20678.1}.
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DR EMBL; JYGZ01000005; KIX20678.1; -; Genomic_DNA.
DR RefSeq; WP_045970724.1; NZ_JYGZ01000005.1.
DR AlphaFoldDB; A0A0D6TKN4; -.
DR STRING; 1603293.SY27_12325; -.
DR PATRIC; fig|1603293.4.peg.2547; -.
DR OrthoDB; 833147at2; -.
DR Proteomes; UP000032747; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000313|EMBL:KIX20678.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000032747}.
FT DOMAIN 16..70
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 493 AA; 57355 MW; 039E67E964E68797 CRC64;
MNLERDYIKL IFGLKLKQAR TNRNLSLFGL AKITGLSKSY LNEIEKGKKY PKTDKIILLS
EKLEVPYDNM VSLKLDNNLA PIGEILKSGI LKEIPLELFG IQEDDLIDII ANAPAKVNAF
ISTIIEIAQH YNLSRESFFL ASLRSYQETQ NNYFEDLEQK VEHFAKAFHV DLDLQISLDE
LKAILVEEYN YKIIELVFSE HEELGDLRSI FVPKSKTLLI STDVDEFQKA FIFAKEIAYN
YLEIKERLYT FSWIKFDNFD QVLNNFYASY FAGALLLPKK KLIGNLNLFV SREAPKPQEF
VQLISDFKVS PETFYQRLTN ILPKDFQLKN LFFLRMSHKI GSGNYKIKKE LHITNQQEPH
ANEMNEHYCR RWVSVKTIIE SIKQNKNHFF DAQISRYENS NNEYLVFSSA TPDPFKKDHI
RSISVGILIT PTLKKKFKFI DNESIIKQVV GVTCETCAVK NCLERAAAPI QLERKRRNEN
TDLIVNSYIQ KYS
//
