ID A0A0D7W1G6_9FLAO Unreviewed; 524 AA.
AC A0A0D7W1G6;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=HTH luxR-type domain-containing protein {ECO:0000259|SMART:SM00421};
GN ORFNames=PK35_13125 {ECO:0000313|EMBL:KJD31697.1};
OS Tamlana nanhaiensis.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Tamlana.
OX NCBI_TaxID=1382798 {ECO:0000313|EMBL:KJD31697.1, ECO:0000313|Proteomes:UP000032361};
RN [1] {ECO:0000313|EMBL:KJD31697.1, ECO:0000313|Proteomes:UP000032361}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FHC16 {ECO:0000313|EMBL:KJD31697.1,
RC ECO:0000313|Proteomes:UP000032361};
RX PubMed=25735434; DOI=10.1007/s10482-015-0410-x;
RA Liu X., Lai Q., Du Y., Li G., Sun F., Shao Z.;
RT "Tamlana nanhaiensis sp. nov., isolated from surface seawater collected
RT from the South China Sea.";
RL Antonie Van Leeuwenhoek 107:1189-1196(2015).
CC -!- SIMILARITY: Belongs to the Rap family. {ECO:0000256|ARBA:ARBA00038253}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJD31697.1}.
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DR EMBL; JTDV01000013; KJD31697.1; -; Genomic_DNA.
DR RefSeq; WP_044627018.1; NZ_JTDV01000013.1.
DR AlphaFoldDB; A0A0D7W1G6; -.
DR STRING; 1382798.PK35_13125; -.
DR PATRIC; fig|1382798.3.peg.1186; -.
DR OrthoDB; 1090267at2; -.
DR Proteomes; UP000032361; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR46630; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR PANTHER; PTHR46630:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR Pfam; PF13424; TPR_12; 2.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00421; HTH_LUXR; 1.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF48452; TPR-like; 2.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000032361};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 325..344
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 464..521
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|SMART:SM00421"
FT COILED 295..322
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 347..374
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 524 AA; 59729 MW; 37CD6F5E1D0F4FFF CRC64;
MRYSKQLFIG VFLILVGFLG AQELEVSKHV TQKINQLKQA LILANKTSDT MLLAKNYIQL
ADFYKSLGLD SEAIKNYHTA QEFQLKNDSL FVYANNQIAA IHQNLKQFDE AKTYLNESVF
LAEKINYKKG LATANAILGS VFEKLGDYNK ALQYENNSLS IFKALKDSTG IALTNENIGS
IYEDLEQYKL AQTFFEKANT FETDSLSDLK INILNNLGDV KRKQGFILEG LKFSEKALQL
ALKSGNISQE ESALKDLART YAELNDFETA YSYTTKQQQV SEQELKVHNA NLVSAMQVLH
NVKEAEAKVA LLNQQNQVSK AKQTAIILVS LAVILVFLLW LIYLRKRKKQ EQKLLKYKQK
LLQADLDIKT AEEEALKREI DIKISALTNY SLKIAHKNKM LTDLSRTLTN LKSRNGEFVK
SKLVDLSKAI NSDLSNDNEW TELMDFFSQI HPNFFKNLKA QLQDETLTSS EFRLCMLLRL
NLTSKAIASI LNITPDSVRI ARYRMRKKLP IAQKDDLQAY LINL
//
