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Database: UniProt
Entry: A0A0D9V401_9ORYZ
LinkDB: A0A0D9V401_9ORYZ
Original site: A0A0D9V401_9ORYZ 
ID   A0A0D9V401_9ORYZ        Unreviewed;      1635 AA.
AC   A0A0D9V401;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   13-SEP-2023, entry version 35.
DE   RecName: Full=Homeobox domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Leersia perrieri.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX   NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180};
RN   [1] {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA   Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA   Zhang J., Wing R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:LPERR01G22320.3}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR   EnsemblPlants; LPERR01G22320.3; LPERR01G22320.3; LPERR01G22320.
DR   Gramene; LPERR01G22320.3; LPERR01G22320.3; LPERR01G22320.
DR   Proteomes; UP000032180; Chromosome 1.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR007759; Asxl_HARE-HTH.
DR   InterPro; IPR018501; DDT_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR044977; RLT1/2.
DR   InterPro; IPR028942; WHIM1_dom.
DR   InterPro; IPR028941; WHIM2_dom.
DR   PANTHER; PTHR36968:SF15; -; 1.
DR   PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR   Pfam; PF02791; DDT; 1.
DR   Pfam; PF05066; HARE-HTH; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   Pfam; PF15612; WHIM1; 1.
DR   Pfam; PF15613; WSD; 1.
DR   SMART; SM00571; DDT; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS50827; DDT; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS51913; HTH_HARE; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT   DOMAIN          40..100
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DOMAIN          609..668
FT                   /note="DDT"
FT                   /evidence="ECO:0000259|PROSITE:PS50827"
FT   DOMAIN          785..854
FT                   /note="HTH HARE-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51913"
FT   DNA_BIND        42..101
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT   REGION          1..43
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          97..120
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          139..164
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          408..534
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          851..882
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          986..1037
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        408..530
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        867..882
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1635 AA;  182734 MW;  53264A0582FDA770 CRC64;
     MDDGDGDGKA PAEAPAAAAA STPPAAAAAA AGSAGASGSG EKTVKRMMKS PYQLEVLEKT
     YAVEQYPSET LRAELSAKIG LSDRQLQMWF CHRRLKDRKP PTKRQRREEE AAAVPLMPPP
     PVLPPSALPL ASSELLIRGS SPYDEPLPPP VHSRRGAGRS SAVPRLSGRY YEPVPVMLPP
     PPMASMQLTP SELRVIHSVE SQLGEPLRED GPVLGIEFEE LPPGSFGAPI VPEQQKQSVR
     SYDTKIYSRH DSKLLKASAF FPSVEHPFVP NSFAGKRKSM VGNSPLVHPH TGSRAVHEYQ
     FLPEQPSDRD EGASRSRYYD TPVEASKSRM ASHTPGSHLL PGSEEAAYAF QGQTSCSGLL
     PQSGRPEVLP AVPADYEMIQ SNSNLSSVPI EGQYGIAGFE NTLLPSERRA YNDEDGSRVD
     RKRKHNEEAK IAKEVEAHER RIRKELEKQD MMNRKREEQM RKEMERHDRE RRKEEDRLLR
     ERQREAERFE REQRREHERM ERFLQKQSRR AEKQRQKEEL RKEKEAARQK AASARATARR
     IAREYMELME DEHLELMELA AQSKGTSMLC LDSDTLQQLD SFRGMLSPFP PERVGLKVPF
     LIKPWTISED NVGKLLMVWK FSITFADVLE LSSVTFDEFV QSLHDYDSRL LGELHIALLK
     SIIKDIEDVS RTPSVALGVN PGGGHPQIVE GAYAWGFNIR SWQRHLNVLT WPEILRQFAL
     SAGFGPQLKK RNTEDVYYRD DNEGHDGKDV ISTLRNGSAA VNAAALMKER GYTHRRRSRH
     RLTPGTVKFA AFHVLSLEGS KGLTILEVAE RIQKSGLRDL TTSKTPEASI AAALSRDTKL
     FERTAPSTYC VKSPYRKDPA DSEASKISLD KPSSANTSGD SLVRASSDYH EVARKDKEID
     ESNQGEPWVQ GLTEGDYCDL SVEERLNALV TLVGVANEGN FIRAVLEERL ESANALKKQM
     LAEAQVDKRR TKEDFAGRVQ YNSNMNLKAD VNQENASEST PTPFRNADKD NDGNAGVVNN
     NNEITDHGSN AANTSYERNG LGQDITATPE TLSIQQYVYA DKTRSQLRAY IGHRAEQLFV
     YRSLPLGQDR RRNRYWQFST SASPNDPGSG RIFFESRDGY WRVIDSEEAF DSLVASLDTR
     GSREAQLHSM LQRIEPTFKE AIKRKQSAVV EQSAGRYLKN GATEMTRASH RSEVSIEFGN
     PSNNLSGVTS DCATAYSDSF KIELGRNDVE KAAISKRAAV FLRWMWGECN DRKLTCAMEY
     GKKRCSELMH SCNYCYQIYL TEERHCSSCH KIFKSIHNFS DHSSPCEEKR RTDNNWKMQT
     ADPSVPIGMR LLKLQLSTIE ASIPPEAIQP SWTDGYRKSW GVKLHSTTSL EEIFQMLTLL
     EGAIKRDYLS SDFETTTELL KLNTQDNASQ NHLGLSGSAA VLPWVPSTTA AIALRMLDLD
     SAVTYIQNQK MERDGGDSMK LPSRFAVKNT QELEPLESTG FDLYDGRCVA GVVDEEVEEV
     AGEAEAGVEA EGSQEVLAAH LGSDLRMKTK PQGRTLVEGV LVVVVVGEDV ELLGHGNHLR
     EGADQFPRKI CWGALACLAM QSLPVWSLQG AQVLMSGAWR TEGRTLKSDF TSVNDMRVQS
     PMGPHKTHMS VTKSL
//
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