ID A0A0D9V401_9ORYZ Unreviewed; 1635 AA.
AC A0A0D9V401;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 13-SEP-2023, entry version 35.
DE RecName: Full=Homeobox domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR01G22320.3, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR01G22320.3}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EnsemblPlants; LPERR01G22320.3; LPERR01G22320.3; LPERR01G22320.
DR Gramene; LPERR01G22320.3; LPERR01G22320.3; LPERR01G22320.
DR Proteomes; UP000032180; Chromosome 1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR044977; RLT1/2.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968:SF15; -; 1.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50827; DDT; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
DR PROSITE; PS51913; HTH_HARE; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW ECO:0000256|RuleBase:RU000682};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 40..100
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DOMAIN 609..668
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT DOMAIN 785..854
FT /note="HTH HARE-type"
FT /evidence="ECO:0000259|PROSITE:PS51913"
FT DNA_BIND 42..101
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 97..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 139..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 408..534
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 851..882
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 986..1037
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 408..530
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 867..882
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1635 AA; 182734 MW; 53264A0582FDA770 CRC64;
MDDGDGDGKA PAEAPAAAAA STPPAAAAAA AGSAGASGSG EKTVKRMMKS PYQLEVLEKT
YAVEQYPSET LRAELSAKIG LSDRQLQMWF CHRRLKDRKP PTKRQRREEE AAAVPLMPPP
PVLPPSALPL ASSELLIRGS SPYDEPLPPP VHSRRGAGRS SAVPRLSGRY YEPVPVMLPP
PPMASMQLTP SELRVIHSVE SQLGEPLRED GPVLGIEFEE LPPGSFGAPI VPEQQKQSVR
SYDTKIYSRH DSKLLKASAF FPSVEHPFVP NSFAGKRKSM VGNSPLVHPH TGSRAVHEYQ
FLPEQPSDRD EGASRSRYYD TPVEASKSRM ASHTPGSHLL PGSEEAAYAF QGQTSCSGLL
PQSGRPEVLP AVPADYEMIQ SNSNLSSVPI EGQYGIAGFE NTLLPSERRA YNDEDGSRVD
RKRKHNEEAK IAKEVEAHER RIRKELEKQD MMNRKREEQM RKEMERHDRE RRKEEDRLLR
ERQREAERFE REQRREHERM ERFLQKQSRR AEKQRQKEEL RKEKEAARQK AASARATARR
IAREYMELME DEHLELMELA AQSKGTSMLC LDSDTLQQLD SFRGMLSPFP PERVGLKVPF
LIKPWTISED NVGKLLMVWK FSITFADVLE LSSVTFDEFV QSLHDYDSRL LGELHIALLK
SIIKDIEDVS RTPSVALGVN PGGGHPQIVE GAYAWGFNIR SWQRHLNVLT WPEILRQFAL
SAGFGPQLKK RNTEDVYYRD DNEGHDGKDV ISTLRNGSAA VNAAALMKER GYTHRRRSRH
RLTPGTVKFA AFHVLSLEGS KGLTILEVAE RIQKSGLRDL TTSKTPEASI AAALSRDTKL
FERTAPSTYC VKSPYRKDPA DSEASKISLD KPSSANTSGD SLVRASSDYH EVARKDKEID
ESNQGEPWVQ GLTEGDYCDL SVEERLNALV TLVGVANEGN FIRAVLEERL ESANALKKQM
LAEAQVDKRR TKEDFAGRVQ YNSNMNLKAD VNQENASEST PTPFRNADKD NDGNAGVVNN
NNEITDHGSN AANTSYERNG LGQDITATPE TLSIQQYVYA DKTRSQLRAY IGHRAEQLFV
YRSLPLGQDR RRNRYWQFST SASPNDPGSG RIFFESRDGY WRVIDSEEAF DSLVASLDTR
GSREAQLHSM LQRIEPTFKE AIKRKQSAVV EQSAGRYLKN GATEMTRASH RSEVSIEFGN
PSNNLSGVTS DCATAYSDSF KIELGRNDVE KAAISKRAAV FLRWMWGECN DRKLTCAMEY
GKKRCSELMH SCNYCYQIYL TEERHCSSCH KIFKSIHNFS DHSSPCEEKR RTDNNWKMQT
ADPSVPIGMR LLKLQLSTIE ASIPPEAIQP SWTDGYRKSW GVKLHSTTSL EEIFQMLTLL
EGAIKRDYLS SDFETTTELL KLNTQDNASQ NHLGLSGSAA VLPWVPSTTA AIALRMLDLD
SAVTYIQNQK MERDGGDSMK LPSRFAVKNT QELEPLESTG FDLYDGRCVA GVVDEEVEEV
AGEAEAGVEA EGSQEVLAAH LGSDLRMKTK PQGRTLVEGV LVVVVVGEDV ELLGHGNHLR
EGADQFPRKI CWGALACLAM QSLPVWSLQG AQVLMSGAWR TEGRTLKSDF TSVNDMRVQS
PMGPHKTHMS VTKSL
//