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Database: UniProt
Entry: A0A0D9VE73_9ORYZ
LinkDB: A0A0D9VE73_9ORYZ
Original site: A0A0D9VE73_9ORYZ 
ID   A0A0D9VE73_9ORYZ        Unreviewed;       804 AA.
AC   A0A0D9VE73;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=Splicing factor 3A subunit 1 {ECO:0008006|Google:ProtNLM};
OS   Leersia perrieri.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX   NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180};
RN   [1] {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180}
RP   NUCLEOTIDE SEQUENCE.
RA   Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA   Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA   Zhang J., Wing R.;
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:LPERR02G08710.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR   AlphaFoldDB; A0A0D9VE73; -.
DR   STRING; 77586.A0A0D9VE73; -.
DR   EnsemblPlants; LPERR02G08710.1; LPERR02G08710.1; LPERR02G08710.
DR   Gramene; LPERR02G08710.1; LPERR02G08710.1; LPERR02G08710.
DR   eggNOG; KOG0007; Eukaryota.
DR   Proteomes; UP000032180; Chromosome 2.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR   CDD; cd01800; Ubl_SF3a120; 1.
DR   Gene3D; 1.10.10.790; Surp module; 2.
DR   InterPro; IPR045146; SF3A1.
DR   InterPro; IPR022030; SF3A1_dom.
DR   InterPro; IPR035563; SF3As1_ubi.
DR   InterPro; IPR000061; Surp.
DR   InterPro; IPR035967; SWAP/Surp_sf.
DR   InterPro; IPR000626; Ubiquitin-like_dom.
DR   InterPro; IPR029071; Ubiquitin-like_domsf.
DR   PANTHER; PTHR15316; SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; 1.
DR   PANTHER; PTHR15316:SF1; SPLICING FACTOR 3A SUBUNIT 1; 1.
DR   Pfam; PF12230; PRP21_like_P; 1.
DR   Pfam; PF01805; Surp; 2.
DR   Pfam; PF00240; ubiquitin; 1.
DR   SMART; SM00648; SWAP; 2.
DR   SMART; SM00213; UBQ; 1.
DR   SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR   SUPFAM; SSF54236; Ubiquitin-like; 1.
DR   PROSITE; PS50128; SURP; 2.
DR   PROSITE; PS50053; UBIQUITIN_2; 1.
PE   4: Predicted;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT   DOMAIN          55..97
FT                   /note="SURP motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50128"
FT   DOMAIN          184..226
FT                   /note="SURP motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50128"
FT   DOMAIN          729..785
FT                   /note="Ubiquitin-like"
FT                   /evidence="ECO:0000259|PROSITE:PS50053"
FT   REGION          1..44
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          107..157
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          648..681
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        12..31
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        654..671
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   804 AA;  88422 MW;  F4D14EAE61C8B144 CRC64;
     MGAAILPLPA PDGSSSPQPP PPPPGAAAKP DPPPTVATHT RTIGIIHPPP DIRVIIEKTA
     TFVSKNGPEF ERRIVSSNAS NAKFNFLQPS DPYHAYYQHR VSELAAQPPS SAAADAAAAP
     ESDESGAVVA ADSAAAPSGD GAVAEADHSA PFRVPPPTKV LVPPKAELYT MHLPEGITGE
     ELDIIKLTAQ FVARNGKSFL TSLAQRENNN PQFHFIRPTH SMFTFFTKLT DTYSRVLNPV
     EGMPALLKEL QDGAKDLTTV LERCLNRLEW DRSQEQARQQ AEDEIEQERM LMQMIDWHDF
     VVVEQIEFAD DECEGLPVPL TLEELKRRKR IEDLGEEEAA IELAEPAKDV EMEMDEEEMQ
     LVEEGMRAAR LEENEGVQVR VAGDEEPPMR IVKNYKRPEE RIPAERDPTK FVVSPITGEL
     IPISEMEEHM RISLIDPKYK EQKERMLAKI KETTLAPDDE ISRNIVGLAR TRPDIFGTTE
     EEVSNAVKAE IEKKKDEQPK QVIWDGHSGS IGRTATQALS MGGEEQVDAS NVPGPAPLPR
     PPMPLIRPPQ PLPLVNVPRF QPNAMPYPGP PPQPHLMQGL PHMMSTMHPP PPPPIPGQPQ
     MIRMPGSMGP MPTNIPPPPP GQNPFMPGPP RAYPMPPPPH MPTMATMVNP IGIPQGQPPL
     PPQPPAEEQP PQPDEPEPKR LRTDDASLIP AEQFLAQHPG PAHISVSVPN LDEGNLRGQV
     LEIDVQSLSD TVGSLKEQIA GELQLPANKQ KLSVRTSFLK DNLTLAYYNI GPGVVINLTL
     RERERISESG LLRTIQTQMD SWAS
//
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