ID A0A0D9VE73_9ORYZ Unreviewed; 804 AA.
AC A0A0D9VE73;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=Splicing factor 3A subunit 1 {ECO:0008006|Google:ProtNLM};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR02G08710.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR02G08710.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; A0A0D9VE73; -.
DR STRING; 77586.A0A0D9VE73; -.
DR EnsemblPlants; LPERR02G08710.1; LPERR02G08710.1; LPERR02G08710.
DR Gramene; LPERR02G08710.1; LPERR02G08710.1; LPERR02G08710.
DR eggNOG; KOG0007; Eukaryota.
DR Proteomes; UP000032180; Chromosome 2.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR CDD; cd01800; Ubl_SF3a120; 1.
DR Gene3D; 1.10.10.790; Surp module; 2.
DR InterPro; IPR045146; SF3A1.
DR InterPro; IPR022030; SF3A1_dom.
DR InterPro; IPR035563; SF3As1_ubi.
DR InterPro; IPR000061; Surp.
DR InterPro; IPR035967; SWAP/Surp_sf.
DR InterPro; IPR000626; Ubiquitin-like_dom.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR15316; SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED; 1.
DR PANTHER; PTHR15316:SF1; SPLICING FACTOR 3A SUBUNIT 1; 1.
DR Pfam; PF12230; PRP21_like_P; 1.
DR Pfam; PF01805; Surp; 2.
DR Pfam; PF00240; ubiquitin; 1.
DR SMART; SM00648; SWAP; 2.
DR SMART; SM00213; UBQ; 1.
DR SUPFAM; SSF109905; Surp module (SWAP domain); 2.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
DR PROSITE; PS50128; SURP; 2.
DR PROSITE; PS50053; UBIQUITIN_2; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT DOMAIN 55..97
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 184..226
FT /note="SURP motif"
FT /evidence="ECO:0000259|PROSITE:PS50128"
FT DOMAIN 729..785
FT /note="Ubiquitin-like"
FT /evidence="ECO:0000259|PROSITE:PS50053"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 107..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 648..681
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 12..31
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 654..671
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 804 AA; 88422 MW; F4D14EAE61C8B144 CRC64;
MGAAILPLPA PDGSSSPQPP PPPPGAAAKP DPPPTVATHT RTIGIIHPPP DIRVIIEKTA
TFVSKNGPEF ERRIVSSNAS NAKFNFLQPS DPYHAYYQHR VSELAAQPPS SAAADAAAAP
ESDESGAVVA ADSAAAPSGD GAVAEADHSA PFRVPPPTKV LVPPKAELYT MHLPEGITGE
ELDIIKLTAQ FVARNGKSFL TSLAQRENNN PQFHFIRPTH SMFTFFTKLT DTYSRVLNPV
EGMPALLKEL QDGAKDLTTV LERCLNRLEW DRSQEQARQQ AEDEIEQERM LMQMIDWHDF
VVVEQIEFAD DECEGLPVPL TLEELKRRKR IEDLGEEEAA IELAEPAKDV EMEMDEEEMQ
LVEEGMRAAR LEENEGVQVR VAGDEEPPMR IVKNYKRPEE RIPAERDPTK FVVSPITGEL
IPISEMEEHM RISLIDPKYK EQKERMLAKI KETTLAPDDE ISRNIVGLAR TRPDIFGTTE
EEVSNAVKAE IEKKKDEQPK QVIWDGHSGS IGRTATQALS MGGEEQVDAS NVPGPAPLPR
PPMPLIRPPQ PLPLVNVPRF QPNAMPYPGP PPQPHLMQGL PHMMSTMHPP PPPPIPGQPQ
MIRMPGSMGP MPTNIPPPPP GQNPFMPGPP RAYPMPPPPH MPTMATMVNP IGIPQGQPPL
PPQPPAEEQP PQPDEPEPKR LRTDDASLIP AEQFLAQHPG PAHISVSVPN LDEGNLRGQV
LEIDVQSLSD TVGSLKEQIA GELQLPANKQ KLSVRTSFLK DNLTLAYYNI GPGVVINLTL
RERERISESG LLRTIQTQMD SWAS
//