ID A0A0D9VTY5_9ORYZ Unreviewed; 816 AA.
AC A0A0D9VTY5;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=MIF4G domain-containing protein {ECO:0000259|SMART:SM00543};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR03G15000.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR03G15000.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR03G15000.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR03G15000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the NCBP1 family.
CC {ECO:0000256|ARBA:ARBA00007413}.
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DR AlphaFoldDB; A0A0D9VTY5; -.
DR STRING; 77586.A0A0D9VTY5; -.
DR EnsemblPlants; LPERR03G15000.1; LPERR03G15000.1; LPERR03G15000.
DR Gramene; LPERR03G15000.1; LPERR03G15000.1; LPERR03G15000.
DR eggNOG; KOG1104; Eukaryota.
DR HOGENOM; CLU_013207_1_0_1; -.
DR Proteomes; UP000032180; Chromosome 3.
DR GO; GO:0005845; C:mRNA cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:EnsemblPlants.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000339; F:RNA cap binding; IEA:EnsemblPlants.
DR GO; GO:1901527; P:abscisic acid-activated signaling pathway involved in stomatal movement; IEA:EnsemblPlants.
DR GO; GO:0000380; P:alternative mRNA splicing, via spliceosome; IEA:EnsemblPlants.
DR GO; GO:0051607; P:defense response to virus; IEA:EnsemblPlants.
DR GO; GO:0048574; P:long-day photoperiodism, flowering; IEA:EnsemblPlants.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0031053; P:primary miRNA processing; IEA:EnsemblPlants.
DR GO; GO:0000394; P:RNA splicing, via endonucleolytic cleavage and ligation; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SMART; SM00543; MIF4G; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180}.
FT DOMAIN 2..209
FT /note="MIF4G"
FT /evidence="ECO:0000259|SMART:SM00543"
FT REGION 732..782
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 675..702
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 756..770
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 816 AA; 93449 MW; C754460649D49F10 CRC64;
MSAGWRTLLL RIGDRCPEYG GSTDHKEHIE TCYGVLCREY EHSKDAIFEI GLINLENEDF
AKDIVDMTHA NLQDALHNEN RDRIRILLRF LCGLMCSKVV LPNSIIETFE TLLSSAATIL
DEETGNPSWQ PRADFYVYCI LASLPWGGSE LFEQVPDEFE RVLVGIQSYI SIRRHFDDIA
FSVFETDEGN SPNKKDFIED LWERIQVLSR NGWKVKSVPK PHLSFEAQLV AGVSHRFSPI
SCPPPTILQS SSEIVKGQEK HEADLKYPQR LRRLHIFPTN KAENMQPVDR FVVEECILDL
LLFFNGCRKE CAFYLVSLPV PFRYEYLMAE TIFSQLLLLP SPPFRPIYYT LVIIDLCKAL
PAAFPSVVIG AVHALFDRIS NMDMECRTRL ILWFSHHLSN FQFIWPWQEW AYVKDLPKWA
PQRVFVQEVL EREIRLSYFD KIKQSIEDAA ELEELLPPKA GPNFRYHTDE GKESPDGYRL
SKELVGMVRG KKTVHDIISW IEEQIIPANG AKFALDVVSH TLLDIGSKSF THLITVLERY
YQIISKLCPN EEMQLLLMDE VSAYWKNSTQ MIAIAIDRMM GYRLISNLAI VKWVFSPASV
DQFHVSDRPW EILRNAVSKT YNRICDLRKE IQTLRKGLPA AKEASEKASK ELEEAKSIIE
IVDGQSVPSE NPGRLRRLQV RADKTKEEEV NIEESLEAKE ALLARGLEES KELLRLLFKS
FVDVLTERLP PVSADGEVPN LRAGDPNADS VTRDPEATTM EIDDENGADN DSHPNGQNKK
AGHNVGELEQ WCLCTLGYLK SFSRQYATEW ARIAMA
//
