ID A0A0D9W105_9ORYZ Unreviewed; 1103 AA.
AC A0A0D9W105;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=U1-type domain-containing protein {ECO:0000259|SMART:SM00451};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR03G33940.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR03G33940.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR03G33940.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR03G33940.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D9W105; -.
DR STRING; 77586.A0A0D9W105; -.
DR EnsemblPlants; LPERR03G33940.1; LPERR03G33940.1; LPERR03G33940.
DR Gramene; LPERR03G33940.1; LPERR03G33940.1; LPERR03G33940.
DR eggNOG; KOG4727; Eukaryota.
DR Proteomes; UP000032180; Chromosome 3.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR032795; DUF3741-assoc.
DR InterPro; IPR025486; DUF4378.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR21726:SF65; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR21726; PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED; 1.
DR Pfam; PF14309; DUF4378; 1.
DR Pfam; PF14383; VARLMGL; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032180}.
FT DOMAIN 981..1015
FT /note="U1-type"
FT /evidence="ECO:0000259|SMART:SM00451"
FT REGION 25..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 266..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 378..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 927..958
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1030..1103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 281..296
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 329..343
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 344..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 384..441
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 444..471
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1030..1081
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1103 AA; 122634 MW; 02DC6743BCBFA4EA CRC64;
MDVEKPTSKG HGFFSLFDWG KKSKKRLVSG SGSNSPVSRF SEDSKDFDGA TPNSRPNLFL
EDASSLKESS EHSCSSSVID EEALARRGPT VVARLMGLDS MPAASSSGSY TMPLTVQQSL
HNNNIHDELI GRSYVGSPLK MPSSPLKMPG SPLKMPGSPH KMPGSPIDRF RMEALPLRFA
KRTQSVAQHK SPPVKNPSHI SNRNAADIME AAYRIMRPGV EDISSYRIRD VGYANDVRVY
SQREIAIVQQ RLPRMNEALK KRDGLTSYRL PGGKPLGGSL KRSGNTFTSG VSQSNGGAPV
GAKAKASIRL SPDSRATNVQ GREGINKVSR KIATQRDPER SMVERNGINQ SKNNNQVGMT
SSSNVLVQNN RKQNAMVKHK VNPKPPTPNQ QSSNGRSING TMKKVGTTST LSENNTQSNR
NLESRPAGHA NRRQNSSAKT IPKPRRLPDG RTLTEKIHPS DKDSADRSQR RVRHNIVIDE
QSPFSTNKKK ISTDIVSFTF TSPVDKPLSG YRLPTHLVEK QFTKNGSSVP NSSETSNAKF
DSIDGDYLGL LLEQKLRELT SGLRSPYCKP TKGVRIYAPS SVLEDSQSVC ETSSIASTDY
DRESVQSYKD GNASFTQVDL ASKSGQSSHS VKYDNDAMDQ MEIERLHLSP HSTWDASIST
ETCSSTESWR SANGTKIFSS TEGATKSDSA HFSKFLEVDA FSEYSDTASS ITVTTTDIPP
SESSSSCRMD YRQEIDFIRE ILNASPVNGH ICSCLERFVN SDILDPQLLE DLNGDIRLAV
GVAEGKAIRM SRRLLFDCVN EILSVKCAYY FNAGYGSWFL GMAVLKKLTA EEMYAEMTDL
KVDEEWMVDE LVYKEMSSPL GSWIDFKMES YEAGIDITTE LLGSLIDEMV ADLLLLDGGQ
SNMSSNPVGV DNTFRRKFDK EEYLERARQR EREEKEDARK GKDKGPPVQR QPLKHRDYEV
DLESRLGKTQ VVTPIAPLSQ QAGYYCSVCE CVVKDSANYL DHINGKKHQR ALGMSMRVER
ASLEQVQKRF ESLKKRKDPA SFSEQDLDER IMKQQQEEEE RKRQRKEKKK EKKKELAAQN
EPEDIDPDVA AMMGFGGFGS SKK
//