ID A0A0D9W2C3_9ORYZ Unreviewed; 1122 AA.
AC A0A0D9W2C3;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=RING-type domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR04G01880.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR04G01880.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR04G01880.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR04G01880.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the SNF2/RAD54 helicase family. RAD16 subfamily.
CC {ECO:0000256|ARBA:ARBA00008438}.
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DR AlphaFoldDB; A0A0D9W2C3; -.
DR STRING; 77586.A0A0D9W2C3; -.
DR EnsemblPlants; LPERR04G01880.1; LPERR04G01880.1; LPERR04G01880.
DR Gramene; LPERR04G01880.1; LPERR04G01880.1; LPERR04G01880.
DR eggNOG; KOG1001; Eukaryota.
DR HOGENOM; CLU_000315_2_5_1; -.
DR Proteomes; UP000032180; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0016818; F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0008152; P:metabolic process; IEA:UniProt.
DR CDD; cd18008; DEXDc_SHPRH-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR014905; HIRAN.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR InterPro; IPR015940; UBA.
DR InterPro; IPR009060; UBA-like_sf.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45626:SF22; DNA REPAIR PROTEIN RAD5; 1.
DR PANTHER; PTHR45626; TRANSCRIPTION TERMINATION FACTOR 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08797; HIRAN; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00910; HIRAN; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR SUPFAM; SSF46934; UBA-like; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS50030; UBA; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 16..57
FT /note="UBA"
FT /evidence="ECO:0000259|PROSITE:PS50030"
FT DOMAIN 528..715
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 886..927
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 957..1117
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 68..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 563..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1122 AA; 124941 MW; C904C038F286DEB1 CRC64;
MTAGDWPESP SQEVLYADEI DAVRAVLGSG LAEADVVAAL SRCGGNAERA INALLDVADT
TAAKIAPVKA ERDASGAAPK KPPPPTHVKL EVLDVDEPLG SQESNGCSAK PLKVKEHTDD
FPHRVKKEER YDGVPAKRGG AGAGDGISLV PRPKKRTRVE DDEVEMIDLT ATNPLPYLNP
RPIRAVPPPE AMEMYESRQR VRAPAPATSA PANDWRMVVA PPDAEFGDFP EERDWFLVGR
SYVTGLSTNR GRRRMDAGEL VHFSFPSFER TYGGIKVSNK KAAALAEIVR FSTKRAGEIG
KLSTEWTKCL VPLVSSSKVK IQGKIVLPTV ELRLMQEIML YVSFYIHRSV FTAVGDNSSL
NLVAPANADF STNPLYRLFG LLNLRAFAKA DITPEELSTG KRPNLRGDGN EDEPMAIVGL
ENRRTAGQTF QEQGTDEQAI SEAALNKIVG TAETYDLEEA EPPSTLVSVL KPYQKEALFW
MSQLEKGIDG DQAKKTLHPC WSAYKIVDKR APAVYVNVFT GQASTQFQSV TQSTRGGILA
DAMGLGKTVM TIALILSNPR GEVEQDMRGA RGRDTRAQTS GSSVRGGTLI VCPMALLGQW
KDELEAHSTP GALSVFVYYG GDRTADLRFM AGHSVVLTTY GVLQSAHKND GSSVFHRIDW
CRVVLDEAHT IKSPKTKAAR AAFELTSHCR WCLTGTPLQN NLEDLFSLLC FLHVEPWCDA
TWWHKLIQRP YENGDEKGLK LVRAILRPLM LRRTKETKDK MGNPILVLPP ANIEIVECEQ
SEDERDFYEA LFRRSKVQFD KFVAQGSVLN NYANILELLL RLRQCCDHPF LVISRADTQK
YTDLDQLAQR FLEGVQRDSV RRSAPPSQAY VEEVVEEIRQ GATTECPICL ESASDDPVLT
PCAHRMCGEC LLSSWRTPTG GPCPLCRSPI TKAELITLPS QCRFEVDPEN NWKDSCKVQK
LIMILEGLQK KREKSIVFSQ FTSFFDLLEI PFNQKGIKFL RFDGKLSQKH REKVLKEFSE
SQDKLVLLMS LKAGGVGLNL TAASNVFLMD PWWNPAVEEQ AIMRIHRIGQ KRAVQVRRFI
VKDTVEERMH KVQARKQRMI SGALTDDEVR TARIEQLKML FT
//
