ID A0A0D9W653_9ORYZ Unreviewed; 694 AA.
AC A0A0D9W653;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR04G12520.1, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR04G12520.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR04G12520.1, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR04G12520.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
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DR AlphaFoldDB; A0A0D9W653; -.
DR STRING; 77586.A0A0D9W653; -.
DR EnsemblPlants; LPERR04G12520.1; LPERR04G12520.1; LPERR04G12520.
DR Gramene; LPERR04G12520.1; LPERR04G12520.1; LPERR04G12520.
DR eggNOG; KOG3702; Eukaryota.
DR HOGENOM; CLU_027028_0_0_1; -.
DR Proteomes; UP000032180; Chromosome 4.
DR GO; GO:0008143; F:poly(A) binding; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:1900364; P:negative regulation of mRNA polyadenylation; IEA:InterPro.
DR GO; GO:0043488; P:regulation of mRNA stability; IEA:InterPro.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.20.1390.10; PWI domain; 1.
DR InterPro; IPR040366; Nab2/ZC3H14.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR14738:SF32; RNA BINDING (RRM_RBD_RNP MOTIFS) FAMILY PROTEIN; 1.
DR PANTHER; PTHR14738; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14; 1.
DR Pfam; PF01480; PWI; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 519..595
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 94..116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 148..212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 402..424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 646..667
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 169..187
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 188..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..424
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 694 AA; 76675 MW; 18501CEFCDD24C75 CRC64;
MGDRFKGTFT GEGLRLLRER VREKLKELMG DYSDDTLVEY VVVLVRNGRR KDEAAKELEV
FLSDNNDAFI SWLWDHLSSS LHLYVQPKAI STSAETKGTS SNARGMHVHD MTSSTQVVRE
PVAGIQKTTG IQQRREWGGI VREQSEAVPL RSVVNTVSQA EEKDVRRSHA RRRTHSPDTH
HHHHQHRKRS REDDEHQIKR TTSQQAHDAP RRLIQFAVRD AVRTVQPITS RSESASKRLR
SVVSTMASDA PLDVGLQKTN LDVRVPGATA AAFRAAAEAA EDALKEKYTG SVFRRLGRRG
ILNAAEESFG YREQDPEREY VDIDNVHAEN QLDFHERSHY AGDAYMYDRE APKAVDSASD
INGFDDAGAA RYNDLIPYRS TLPSSVGKES LVVGFNTVDG AAKSRSRRSI MQDAPASSGS
KPSERMLDIS VNSITQTHKS ANHETRRNAV KVEPRVPTEL RGVDSRKSNA TLAHVNNTPM
TDKSKDLKRS SSVVEAQKVS SLAVGSCTTG QPEGGTDSRT IFVTNVHFAA TKDALSRHFN
KFGAVLKTLI VTDVSGQPTG SAYIEFLLKE SAEQALTLNG TSFMSRILKV IRRNSAEVPQ
LPGWSRASRG SPFASRLTRT AYPRSAFPGA TRGRLPLRGG ARSLQWKRED ADTVDAGKSS
NSIPIPTGNQ LVSPVARSFT YTRAEPNQDI GATI
//