ID A0A0D9WE21_9ORYZ Unreviewed; 1256 AA.
AC A0A0D9WE21;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 22-FEB-2023, entry version 28.
DE RecName: Full=DNA (cytosine-5-)-methyltransferase {ECO:0000256|ARBA:ARBA00011975};
DE EC=2.1.1.37 {ECO:0000256|ARBA:ARBA00011975};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR05G06410.2, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR05G06410.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR05G06410.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR05G06410.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxycytidine in DNA + S-adenosyl-L-methionine = a 5-
CC methyl-2'-deoxycytidine in DNA + H(+) + S-adenosyl-L-homocysteine;
CC Xref=Rhea:RHEA:13681, Rhea:RHEA-COMP:11369, Rhea:RHEA-COMP:11370,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789,
CC ChEBI:CHEBI:85452, ChEBI:CHEBI:85454; EC=2.1.1.37;
CC Evidence={ECO:0000256|ARBA:ARBA00000743};
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. C5-methyltransferase family. {ECO:0000256|PROSITE-
CC ProRule:PRU01016}.
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DR AlphaFoldDB; A0A0D9WE21; -.
DR EnsemblPlants; LPERR05G06410.1; LPERR05G06410.1; LPERR05G06410.
DR EnsemblPlants; LPERR05G06410.2; LPERR05G06410.2; LPERR05G06410.
DR Gramene; LPERR05G06410.1; LPERR05G06410.1; LPERR05G06410.
DR Gramene; LPERR05G06410.2; LPERR05G06410.2; LPERR05G06410.
DR Proteomes; UP000032180; Chromosome 5.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003682; F:chromatin binding; IEA:InterPro.
DR GO; GO:0003886; F:DNA (cytosine-5-)-methyltransferase activity; IEA:UniProtKB-EC.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd18635; CD_CMT3_like; 1.
DR Gene3D; 2.30.30.490; -; 1.
DR Gene3D; 3.90.120.10; DNA Methylase, subunit A, domain 2; 2.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 2.
DR InterPro; IPR001025; BAH_dom.
DR InterPro; IPR043151; BAH_sf.
DR InterPro; IPR018117; C5_DNA_meth_AS.
DR InterPro; IPR001525; C5_MeTfrase.
DR InterPro; IPR031303; C5_meth_CS.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR10629; CYTOSINE-SPECIFIC METHYLTRANSFERASE; 1.
DR PANTHER; PTHR10629:SF34; DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT2; 1.
DR Pfam; PF01426; BAH; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF00145; DNA_methylase; 1.
DR PRINTS; PR00105; C5METTRFRASE.
DR SMART; SM00439; BAH; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR PROSITE; PS51038; BAH; 1.
DR PROSITE; PS00094; C5_MTASE_1; 1.
DR PROSITE; PS00095; C5_MTASE_2; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS51679; SAM_MT_C5; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW ProRule:PRU01016}; Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW ECO:0000256|PROSITE-ProRule:PRU01016};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW ProRule:PRU01016}.
FT DOMAIN 592..709
FT /note="BAH"
FT /evidence="ECO:0000259|PROSITE:PS51038"
FT DOMAIN 852..905
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 269..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 447..470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 273..288
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..304
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 454..468
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 930
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01016"
SQ SEQUENCE 1256 AA; 137279 MW; 64ED647DC34FAB35 CRC64;
METPPPDENP VSPPAAADDS PPGGGGGGGG GDGDDGAEEA GGFRAGLEPL WTVLFGSPEE
LEPMWSPPRG FEFDAAPEVE PDMDVAGAWD GLPWRSTGLV AGEGAGFAEF GGEIGTSAGA
NSVDAAPEVS ALDSGADCSP ELPLSSSSPP VDLELRAFEP VDDSAPATDS RIPTSVASSE
ANLDGRMVEC TLNSVPSPPF PSPDDIGLGA EDTIKDCSPL EKVALGTLAS VDMDVEDPQM
NAAGNCMTGA SGTVDTSLRR SPRIAKVKSE AAASSIPLNQ NADSPRVSKR NLTDSKKRRS
SEGSKLPVFA RPVSLNTNDL INGVEIEGLR DIVAVRSKSS SYENKNNECL HNQVVVALPA
VNSDKGASVH SPRKTRPASK ALVNSDRVSA ISPMVNGGPP VQKSDSYTPT KRHKLAVAEC
LPNLDGVVGG GGGIVSCNSR LKSAKPQVVN KMPQGRGGRS SQPPKTKRGK TLSVKYLEKL
KRAENANGSK FGSPRVTVMS ELSTKHKLIL DKQLTDSDMF EMDDGSCFFV GDAVPDDEAR
KQWPHRYEIN DQIMKKFSTL NDERISGQTF ANVGKPVLDV KCHYLQAKVS RYTFCIGDCA
FIKGPEGKPN YIGRLLEFFE TKAGEYYFGV QWFFRAEDTV MEKQAQSHDP RRLFYSDLTD
DNLLDCIVSK VTIVQVPPSM DGKSKSDTSF DYYYDMKYSM DYSTFSTIEM GSANNVVQSS
YTGINNDKMK INVNEKHKSP TLEKRDLSLL DLYCGCGGMS TGLCLGARGG GVNLSARWAI
DVDEIACESL RHNHPETRVR NETTDDFLQL LKEWEKLCKT YLKHSKAKAC PDSTTESNNE
TPDCSTAPPE EFEVWKLVDI CFGDPNNVSK RCLYFKVRWK GYSLHYDTWE PVEGLRNCKE
AIRDFVIEGH KHKILPLPGD VDVVCGGPPC QGISGYNRNR EFEEPFKSRL GIMAAGCYGL
PQFRMRVFLL GCHSKEKLPP FPLPTHEAIV KNGCPLAFER NLVGWPNNTP MQLAKPIVLE
DILSDLPEVA NGESRDEMLY VKGPQTEFQR YIRSFNAEVP GPKARVAKDS KLSKLYDHRP
LALDNDNYQR VLQIPKKKGA NFRDLPGVIV GPDNVARLDP TRERILLSSG RPLVLDCILS
YENGKCLRPF GRVWWDEVVG TVLTVPNIRM QALIHPAQDR VLTIRESARL QGFPDNYRFC
GTVKDRYRQI GNAVAIPVGR ALGYALAMAY LKKAGDDPLM VLPPNFAFSH DIGGFT
//