ID A0A0D9Y0F9_9ORYZ Unreviewed; 1208 AA.
AC A0A0D9Y0F9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
OS Leersia perrieri.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Leersia.
OX NCBI_TaxID=77586 {ECO:0000313|EnsemblPlants:LPERR12G13170.2, ECO:0000313|Proteomes:UP000032180};
RN [1] {ECO:0000313|EnsemblPlants:LPERR12G13170.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:LPERR12G13170.2, ECO:0000313|Proteomes:UP000032180}
RP NUCLEOTIDE SEQUENCE.
RA Yu Y., Lee S., de Baynast K., Wissotski M., Liu L., Talag J.,
RA Goicoechea J., Angelova A., Jetty R., Kudrna D., Golser W., Rivera L.,
RA Zhang J., Wing R.;
RL Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:LPERR12G13170.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
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DR AlphaFoldDB; A0A0D9Y0F9; -.
DR EnsemblPlants; LPERR12G13170.2; LPERR12G13170.2; LPERR12G13170.
DR Gramene; LPERR12G13170.2; LPERR12G13170.2; LPERR12G13170.
DR Proteomes; UP000032180; Chromosome 12.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0072344; P:rescue of stalled ribosome; IEA:UniProt.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 2.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000032180};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 988..1003
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 188..248
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 719..796
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 840..984
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1144..1191
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 719..746
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 756..773
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 774..796
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 855..885
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 886..913
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 931..949
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1157..1174
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1208 AA; 133663 MW; 983E2E25232CE8FE CRC64;
MVKARMTTAD VAAEVKCLRR LIGMRLSNVY DITPKTYLFK LMNSSGITES GESEKVLLLM
ESGIRLHTTQ YVRDKSTTPS GFTLKLRKHI RSKRLEDVRM LGYDRIILFQ FGLGSNAHFV
ILELYAQGNI LLTDSEYTVL TLLRSHRDDN KGLAIMSRHR YPVEACRVFE RTDFTKLKDT
LMMSNAIDDK ESSQVTSSSI DAQGPSVSPN DGVTVSDKSE EQSTTTGKKS ASKNKQSSSN
AKGSNSAQPN KLTLKTILGE ALAYGPPLAE HIILDAGLLP SAKVGKDPEG SIDDHTIQSL
VGSISKFEDW LVDVMSGQKI PEGYILMQNK VAAKKNTAPL EGSSASQKIY DEYCPILLNQ
FKSREYDEFE TFDAALDEFY SKIESQRVNQ QQKSKEESAA QRLNKIKLDQ ENRVHTLRKE
VDYSVKMAEL IEYNLEDVDA AIVAVRVSLA NGMSWDALAR MIKEEKKAGN PVAGLIDKLS
FERNCITLLL SNNLDDMDEE EKTAPVEKVE VDLSLSAHAN ARRWYELKKK QESKQEKTIT
AHEKAFKAAE KKTRLQLAQE KTVAAITHMR KVHWFEKFNW FISSENYLII SGRDAQQNEL
IVKRYMSKGD LYVHAELHGA SSTIIKNHKP DMPIPPLTLN QAGSFTVCHS KAWDSKIVTS
AWWVYPHQVS KTAPTGEYLT VGSFMIRGKK NFLPPHPLVM GFGILFRLDE SSLASHLNER
RVRGEDDEAL PDVEAEPQKQ ESNAELDDEL ELLDSDNETG KEKLDDGSSL DNTNVDKVDH
SIPSNALGNA GSTEQLSEIQ TVENNTTSTS KEQTSDYAVS SQLEDLLDKN LGLGPAKVLG
RSSLLSSSPL SVAEDIDDLD MKKTSVREKP YISKADRRKL KKSQNIGDST SDSPNGETAK
KPGNSQQEKG KTNAKPANPK VSRGQKGKLK KIKEKYGEQD EEEREIRMAL LASSGKASQK
DKPSEDLDGA AAAQSKPSTG EDDRSKICYK CKKSGHLSRD CPESTSEVNL ADANVGRGKD
AMDRSSAPAA GSVTMDEDDI HELGDEEKEK LIDLDYLTGN PLPNDILLYA VPVCAPYNAL
QAYKYRVKIT PGTAKKGKAA KTAMSLFVHT VDATNREKEL MKACTDPELV AAIVGNAKIT
APGLTQLKQK QKQKGKKSAK ERQDRQENRA RGPARHGGRR PPPTAAAAAA AAMVRWRRGE
LAVDGWIG
//
