ID   A0A0D9Y4K8_9ORYZ        Unreviewed;      1089 AA.
AC   A0A0D9Y4K8;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   RecName: Full=RNA-dependent RNA polymerase {ECO:0000256|RuleBase:RU363098};
DE            EC=2.7.7.48 {ECO:0000256|RuleBase:RU363098};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM01G06840.3};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM01G06840.3}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM01G06840.3}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
CC   -!- FUNCTION: Probably involved in the RNA silencing pathway and required
CC       for the generation of small interfering RNAs (siRNAs).
CC       {ECO:0000256|RuleBase:RU363098}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.48; Evidence={ECO:0000256|ARBA:ARBA00024517,
CC         ECO:0000256|RuleBase:RU363098};
CC   -!- SIMILARITY: Belongs to the RdRP family. {ECO:0000256|ARBA:ARBA00005762,
CC       ECO:0000256|RuleBase:RU363098}.
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DR   AlphaFoldDB; A0A0D9Y4K8; -.
DR   EnsemblPlants; OGLUM01G06840.3; OGLUM01G06840.3; OGLUM01G06840.
DR   Gramene; OGLUM01G06840.3; OGLUM01G06840.3; OGLUM01G06840.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IEA:UniProtKB-KW.
DR   InterPro; IPR007855; RNA-dep_RNA_pol_euk-typ.
DR   PANTHER; PTHR23079; RNA-DEPENDENT RNA POLYMERASE; 1.
DR   PANTHER; PTHR23079:SF55; RNA-DIRECTED RNA POLYMERASE; 1.
DR   Pfam; PF05183; RdRP; 1.
PE   3: Inferred from homology;
KW   Nucleotidyltransferase {ECO:0000256|RuleBase:RU363098};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU363098};
KW   RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484,
KW   ECO:0000256|RuleBase:RU363098};
KW   RNA-mediated gene silencing {ECO:0000256|RuleBase:RU363098};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU363098}.
SQ   SEQUENCE   1089 AA;  121582 MW;  2E3A5A0D7EB9B975 CRC64;
     MNPHGGGNQM REPALPAAVG AELERLEARL GQLACAEARR QLAELGEPAA ARVLRAIGEA
     RQVRTLSGFI RHMANQERMK RNARGIPTAH SAACISGPCR EEESISTPLY YNEVQMDAQT
     PNDMVEVGSP NQQMPLRLHD NGGSVGHIAR VVPDLANPAV GSPYGRISSV LLQNQNCVEG
     YTPSRGMVSP ASNQVAVQIN FPTQPMAHAL PNDVMMQVGS PGHRMPSGLQ RHMEIDSPIQ
     PIVSTPERVS TSSPVRDLSR RVENMAGPSG SPPCPIWVMP QIPPAICPDT ANVLREVVSP
     QMLALGELEF RKIFMIFAYL SWNKKGVKPP LSTPKSSKIE DVLSVNSIRS LKSMSMAQFE
     SRIWSTFGHD NISSSDRAKN LDSGPGMSKV YRCNIEIRGG TVVKIFKGPY IENRRTHLQK
     VLGDDNVLVV NFMEISSDTE TDLSTYLEHY HKVAEEVYKD GGKENKMKEE NREEENKKCT
     SSVRCYFVRT ESGWNMDEPY ILSGRTIGQA RDLFMHIRTV LTLAKYMLRF ALIVSKTITL
     DVDLSEVLVK LIDDEPCLDI VDCAASKLMG SNNTTEYPLL IQLRLFYNGS AVKGTVLVDK
     RLPPRTIHIR PSMLKIKTYP ELSGVQSVNS LDIVSARNAK KSLSGVQSVN SFEIVSTSNR
     SGRTFTSNNL IALLHYGGVP EEFFMELLQT AIEEADNARF DYAGALNIAF NYADMEDSMP
     ARMILSGIPL EESYLQSRLD FLSLLERKGI KNGKIPIDDC YYLMGTADPT GKLGPNEVCV
     ILDYGQVSGD VLVYKYPGLH PGDIHVLKAT YSSDIEKVVG NSKHAILFPT TGQRSLADEM
     ANSDFDGDIY WVSLNPKLLE HFKPSKPWVP AITPNGTKQK GPEDFNDSEL ERVNIPRDLM
     VKQYPHFMDR SPSYHSSSIL GKIYDKAGDP KPLRSDNVQP TSISSLPCFA ERDVPPAIKQ
     LWQHRYNEYL ADSSLLYAEE ADEEEKKIKF QELYEKYKHL LYGASEFEET PRDLDDVFSE
     ACAIYQIAYE KARSANNVAR CGFAWKVAGR ALCHFYTVKN EGNAVVCSLQ LLRNFRFTKK
     YRKIYRIQS
//