ID A0A0D9YIZ9_9ORYZ Unreviewed; 718 AA.
AC A0A0D9YIZ9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
OS Oryza glumipatula.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM01G45550.2};
RN [1] {ECO:0000313|EnsemblPlants:OGLUM01G45550.2}
RP NUCLEOTIDE SEQUENCE.
RA Wing R.A., Panaud O., Oliveira A.C.;
RT "Oryza genome evolution.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:OGLUM01G45550.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
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DR AlphaFoldDB; A0A0D9YIZ9; -.
DR STRING; 40148.A0A0D9YIZ9; -.
DR EnsemblPlants; OGLUM01G45550.2; OGLUM01G45550.2; OGLUM01G45550.
DR Gramene; OGLUM01G45550.2; OGLUM01G45550.2; OGLUM01G45550.
DR eggNOG; KOG0331; Eukaryota.
DR Proteomes; UP000026961; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd17966; DEADc_DDX5_DDX17; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47958; ATP-DEPENDENT RNA HELICASE DBP3; 1.
DR PANTHER; PTHR47958:SF134; RNA HELICASE; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492};
KW Reference proteome {ECO:0000313|Proteomes:UP000026961};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 273..301
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 304..482
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 510..682
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 75..124
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 684..718
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 273..301
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 83..97
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 718 AA; 77891 MW; 9257F8F6C29052D3 CRC64;
MRPITSLRHG PITRGESCVR DFSCVRATSR LPPSPKDHDT WAIATDLARP HTLRILTHQN
QTTGLLAPPH AAFLPDPNLP RRLPFPSSSS TPTAAAPPDS GEPSRARART ETYRTGDMNP
YDLRYADPSS YRDRRSDLAG APVLAASAPA AANPYAAAYA PAPAAPVAPA GGDFSRFGGR
GRGGGAGGGG WGRGGGGGGG AGGYRGGGGR GGGRDALDSL SLPKPDFRSL IPFEKNFYVE
CPAVQAMSDM DVSQYRRQRD ITVEGHDVPK PVRYFQEANF PDYCMQAIAK SGFVEPTPIQ
SQGWPMALKG RDMIGIAQTG SGKTLSYLLP GLVHVGAQPR LEQGDGPIVL ILAPTRELAV
QIQQESGKFG SYSRTRSTCI YGGAPKGPQI RDLRRGVEIV IATPGRLIDM LEGGHTNLRR
VTYLVLDEAD RMLDMGFEPQ IRKIVAQAWL IRPDRQTLYW SATWPREVES LARQFLQNPY
KVIIGSPDLK ANHSIQQIIE VISEHEKYPR LSKLLSDLMD GSRILIFFQT KKDCDKVTRQ
LRMDGWPALS IHGDKAQAER DYVLAEFKSG KSPIMAATDV AARGLGMFLF FGSGSSHALT
SMEIDNVDIP GKNVKDIKCV INFDFPTTLE DYIHRIGRTG RAGASGTAFT FFTHSNAKFS
RNLVKILREA GQVVNPALES MAKSASSMGG GNFRSRGRGG FGNRSGSNSI PIRGRRPY
//
